DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and F42C5.9

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_501169.1 Gene:F42C5.9 / 177504 WormBaseID:WBGene00018349 Length:552 Species:Caenorhabditis elegans


Alignment Length:426 Identity:97/426 - (22%)
Similarity:160/426 - (37%) Gaps:97/426 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGY--AQEDSPKAEIPSV----------VGIGA-APETNLDPETKTDNNATPNN 67
            |:.:.|..|:|.|.  .:...|::..|::          ||..| .||...:.:.....:||..:
 Worm   181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPISATDPS 245

  Fly    68 ADQRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHP-VLFSEAS 131
            .::.....|.....:.:...|:                ||..:.| .|:.|.|:..| ||..|  
 Worm   246 VERYSIDKDVLKAVIGKVTKEL----------------KVEPWKY-KVLLSIPQNIPTVLIGE-- 291

  Fly   132 WNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQA 196
                     |.::..|.....:..:.:...|..::....|.:|||.| ...:.|||.:|||:..|
 Worm   292 ---------LLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIG-ERVNIVPVIDGYVVESA 346

  Fly   197 VVKSPLGGDFLSRQCRQHLEKHGIDL----SPVYKIASKDVVKERDNGRFTLRK---LPENLTQS 254
            :...|.|...:....|..|..|...|    |||.|:..          ||.|.:   :||     
 Worm   347 ICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLIL----------RFALEQTTYVPE----- 396

  Fly   255 WQNYMLQLMMQDFQMNVLQVLENPFDERVAAQI----PTVHYEFPNGYHQDFGSERFKIAESLFD 315
                       |:|..  :..||. :.|::...    |.:...|      |..:.||...|.||.
 Worm   397 -----------DYQKE--EKSENK-ETRISLDAFTPSPGMQTRF------DIDNSRFLCTEGLFK 441

  Fly   316 NAMLGAG-----QLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLK 375
            ....|..     ||...::..|..|.|.:|:.::.:.||.:|:.|..|:|.::|....|:....:
 Worm   442 PKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHTQ 506

  Fly   376 MISANGSVERRFGAWIGGSILASIGTFQQMWISSQE 411
            :   |.|..|...|::|..|:||..||:...||.|:
 Worm   507 V---NISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 97/426 (23%)
F42C5.9NP_501169.1 ACTIN 179..552 CDD:214592 97/426 (23%)

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