DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and arx-1

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_491066.1 Gene:arx-1 / 171857 WormBaseID:WBGene00000199 Length:425 Species:Caenorhabditis elegans


Alignment Length:443 Identity:112/443 - (25%)
Similarity:192/443 - (43%) Gaps:70/443 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVD 76
            ::.|.|.|.|....::|||....|:..|||.:.:.....:: :.:....||......|...|::.
 Worm     5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASS-NSQAMRWNNRVGAGIDDLDFFIG 68

  Fly    77 TNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKL 141
            ...::...:|..|:..::.|::::|||.|:..:......:::|||.|..|.:|...|...|||..
 Worm    69 DEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYT 133

  Fly   142 TELMFEKYNVPAFFLVKNAVLAAFSSGRA--------TALVVDSGATHTSAVPVHEGYVLSQAVV 198
            .|:|||.:|||..::...||||..:|..:        |.||:|||...|..:||.:|||:...:.
 Worm   134 AEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIK 198

  Fly   199 KSPLGGD----FLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYM 259
            ..|:.|.    |:....|.  .:|.|.....|::|.  ::||    :|.              |:
 Worm   199 HIPIAGRDITYFIQSLLRD--REHTIPAEQSYEVAK--MIKE----KFC--------------YV 241

  Fly   260 LQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPNG-----YHQDFGSERFKIAESLFDNAML 319
            ...:|::|.         .:|...|..:.|  |:..|.     ::.|.|.|||...|..|.....
 Worm   242 CPDVMKEFV---------KYDTDAAKWLRT--YDGINSITKKPFNVDVGYERFLGPEIFFHPEFC 295

  Fly   320 G------AGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMIS 378
            .      ......|.:..|..|||..|:.::|::||:|:.:.|..:|.||::..:....::....
 Worm   296 NPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETL 360

  Fly   379 ANGSVE-------------RRFGAWIGGSILASIGTFQQMWISSQEYEEAGKS 418
            :.|.::             :|:..|.|||:|||...|.|:..:..||.|.|.|
 Worm   361 SGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPS 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 112/442 (25%)
arx-1NP_491066.1 PTZ00280 3..423 CDD:240343 112/443 (25%)
COG5277 7..417 CDD:227602 112/441 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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