DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Acta2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_031418.1 Gene:Acta2 / 11475 MGIID:87909 Length:377 Species:Mus musculus


Alignment Length:415 Identity:140/415 - (33%)
Similarity:217/415 - (52%) Gaps:52/415 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNY 79
            |||.|.|....:.|:|.:|:|:|..||:||             :..:........|:..||. :.
Mouse     9 ALVCDNGSGLCKAGFAGDDAPRAVFPSIVG-------------RPRHQGVMVGMGQKDSYVG-DE 59

  Fly    80 VTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKLTEL 144
            ....|..:.::..::.|:|.|||..||:..:::.|.::..||.||.|.:||..|.:.||||:|::
Mouse    60 AQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREKMTQI 124

  Fly   145 MFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSR 209
            |||.:||||.::...|||:.::|||.|.:|:|||...|..||::|||.|..|:::..|.|..|:.
Mouse   125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTD 189

  Fly   210 QCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVLQV 274
            ...:.|.:.|...   ...|.:::|          |.:.|.|.         .:..||       
Mouse   190 YLMKILTERGYSF---VTTAEREIV----------RDIKEKLC---------YVALDF------- 225

  Fly   275 LENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLG---AG--QLASTSVGMCDA 334
             ||......::......||.|:|.....|:|||:..|:||..:.:|   ||  :....|:..||.
Mouse   226 -ENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDI 289

  Fly   335 DVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASI 399
            |:|..|:.:.|::||.|:..|..:|:.:::...|||..::|:|:   ..||::..|||||||||:
Mouse   290 DIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSILASL 351

  Fly   400 GTFQQMWISSQEYEEAGKSQVERKC 424
            .||||||||.|||:|||.|.|.|||
Mouse   352 STFQQMWISKQEYDEAGPSIVHRKC 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 140/415 (34%)
Acta2NP_031418.1 PTZ00281 3..377 CDD:173506 140/415 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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