DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Acta2

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_031418.1 Gene:Acta2 / 11475 MGIID:87909 Length:377 Species:Mus musculus


Alignment Length:237 Identity:43/237 - (18%)
Similarity:81/237 - (34%) Gaps:70/237 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VHRQLKRQHSG-----------LPQMESLSRFSSIPVVETGIKTAGSVYE----RVKASNGLLTW 51
            |..:.:.||.|           .|:.||..:|:...|::..:.....|.:    :....||:: |
Mouse   731 VKERWRDQHRGRELDATNLLPRKPEQESSRKFNVPSVIDRELPKQKPVLDHEMNQRMGKNGMV-W 794

  Fly    52 GFETAESLTYALIDSLRPATKMIQG-----------PLHQLDSIMCKSLD--------------- 90
            ..:.|.   ..|.|..|..|:|..|           |||.....:.:..:               
Mouse   795 PTDPAR---LCLSDRFRNLTQMEVGEPSSKRQKSFEPLHTASGRLGEDFNRLVPSGRNAKTSLQT 856

  Fly    91 ---LVEQKV----PSMYLPPEMMFWNTKEYMSDHLMKPVLSRANSMKNLGHAVLESRVSNYAAGR 148
               |...||    .|..:.|:   ||....:..:       ..|::.:|.|.:..|......:..
Mouse   857 HSPLASIKVTPTASSNSMQPD---WNVMNMLRTY-------TPNNLASLYHPIAPSSSHGVMSSP 911

  Fly   149 IDGA-LVVCDKY----VERYLPTEPQDQPDSCGAAPPADDSN 185
            :.|: .::..:|    .:|.:.:.|.:. :.||.  |:|.|:
Mouse   912 VSGSRSLIFPQYSTSMSQRRIQSSPLNN-ERCGG--PSDKSS 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 41/229 (18%)
Acta2NP_031418.1 ASKHA_NBD_actin 8..372 CDD:466823
Blue background indicates that the domain is not in the aligned region.

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