DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and actr1a

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001163973.1 Gene:actr1a / 100101796 XenbaseID:XB-GENE-491902 Length:376 Species:Xenopus tropicalis


Alignment Length:422 Identity:125/422 - (29%)
Similarity:208/422 - (49%) Gaps:73/422 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVG-------IGAAPETNLDPETKTDNNATPNNADQRKF 73
            :|.|.|...::.|:|.:..||...|:.||       :..|.|.:|....|.:.:           
 Frog    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHIRVMAGALEGDLFIGPKAEEH----------- 65

  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNN 137
                      |..:.::..|:.|::.:|:..|::..|.|: :.:|:..|.||||.:||..|.|.|
 Frog    66 ----------RGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPRKN 120

  Fly   138 REKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPL 202
            ||:..|:.||.:||||.|:...|||:.:::||.|.:|:|||...|.|||::||:.:..::::..:
 Frog   121 RERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRIDI 185

  Fly   203 GGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDF 267
            .|..:||..|.:|.|.|.|.....:......:|||                              
 Frog   186 AGRDVSRFLRLYLRKEGYDFHTSAEFEIVKTIKER------------------------------ 220

  Fly   268 QMNVLQVLENP-FDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLAS 326
               ...:..|| .||.:..:  ...|..|:|...:.|..||:..|.||...::     |..::..
 Frog   221 ---ACYLSINPQKDETLETE--KAQYYLPDGSTIEIGPARFRAPELLFRPDLIGEECEGIHEVLV 280

  Fly   327 TSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWI 391
            .::...|.|:|.:||.::|::||:||.:||.:||..:::..||.:.::: |||  ..||.:..||
 Frog   281 FAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIR-ISA--PQERLYSTWI 342

  Fly   392 GGSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            |||||||:.||::||:|.:||||.|...:.||
 Frog   343 GGSILASLDTFKKMWVSKKEYEEDGARAIHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 125/422 (30%)
actr1aNP_001163973.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:388382 125/422 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.