DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6550 and AT1G72090

DIOPT Version :9

Sequence 1:NP_611207.1 Gene:CG6550 / 36954 FlyBaseID:FBgn0034214 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_565035.1 Gene:AT1G72090 / 843540 AraportID:AT1G72090 Length:601 Species:Arabidopsis thaliana


Alignment Length:531 Identity:264/531 - (49%)
Similarity:350/531 - (65%) Gaps:48/531 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VDDIEDL---------------ISADDVKPRERYENKKTVTVRAKKRSQIRLESQEEEEKPKPTI 62
            ::|||||               ::|..:.|:.. ::|:.    :.|..||...:::....|    
plant     1 MEDIEDLLAGGVGGAPPGFRLPLNAVGINPKTN-KSKRI----SSKPDQITASNRDSLAPP---- 56

  Fly    63 HESVIPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGYRLSG-KEEADLWLLNSCTVKNPSEDTFR 126
             ...|||||.:::||:||:||.||||||||||:|:||.|:. .|||||||:|:||||:||:....
plant    57 -SMKIPGTQTIYIKTFGCSHNQSDSEYMAGQLSAFGYALTEVPEEADLWLINTCTVKSPSQSAMS 120

  Fly   127 NEIESGMRNGKHVVVAGCVPQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLLQNKKKV 191
            ..|..|....|.:|:|||||||:.....|.|:||:||||||||||:||||||||.|:||..|.. 
plant   121 TLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGVQQIDRVVEIVEETLKGHEVRLLTRKTL- 184

  Fly   192 HGRRVAGAPLSLPKVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEVVERARQSFAEG 256
                   ..|.|||||:|..|||:.||.|||..|||||||||||.|.||..:.:|||.|...:||
plant   185 -------PALDLPKVRRNNFIEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVERVRTVISEG 242

  Fly   257 CCEIWLTSEDTGAYGRDIGSSLPELLWQLVEVIP--EHCMLRVGMTNPPYILEHLEEVANVLQHP 319
            ..||||:||||||||||||.:||.||..:|:.:|  :..|||:||||||:|||||:|:|.||:||
plant   243 VKEIWLSSEDTGAYGRDIGVNLPILLNAIVKELPSDQSTMLRIGMTNPPFILEHLKEIAAVLRHP 307

  Fly   320 RVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEET 384
            .||:||||||||||||||..|.|||...:|..|||.|.|.|||:.||||||||||.||::||.:|
plant   308 CVYTFLHVPVQSGSDSVLTAMNREYTASEFRTVVDTLTELVPGMQIATDIICGFPGETDEDFSQT 372

  Fly   385 MTLCAKYRFPSLFINQFFPRPGTPAAKMDRIPANLVKKRTKRLTDLFYSYEPYADRVGEIYTVLV 449
            :.|...|:||.:.|:||:||||||||||.::.:.:||:|::.||.:|.::.||.........:.:
plant   373 VELIKDYKFPQVHISQFYPRPGTPAAKMKKVQSKIVKQRSRELTSVFEAFAPYTGMECREERIWI 437

  Fly   450 TEVSHDKLHYVGHNKSYEQVLLPMRDNLLGTRVHVRITSASKFSMVGEILDDERDWTRCAKNQEL 514
            |||:.|.:|.|||.|.|.|||:...:::|||....||||..::|:.||:::     |..:.|:| 
plant   438 TEVATDGIHLVGHTKGYVQVLVTGPESMLGTSAMARITSVGRWSVFGEVIE-----TFSSANRE- 496

  Fly   515 PNVQVQTRSRE 525
                  |:|||
plant   497 ------TKSRE 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6550NP_611207.1 MiaB-like-B 72..549 CDD:273703 247/457 (54%)
UPF0004 72..151 CDD:279287 45/79 (57%)
Radical_SAM 215..413 CDD:100105 127/199 (64%)
AT1G72090NP_565035.1 UPF0004 65..156 CDD:279287 49/90 (54%)
MiaB-like-B 66..487 CDD:273703 240/428 (56%)
Radical_SAM 201..406 CDD:100105 128/204 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 223 1.000 Domainoid score I704
eggNOG 1 0.900 - - E1_COG0621
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9830
Inparanoid 1 1.050 491 1.000 Inparanoid score I327
OMA 1 1.010 - - QHG62224
OrthoDB 1 1.010 - - D835984at2759
OrthoFinder 1 1.000 - - FOG0005706
OrthoInspector 1 1.000 - - oto2926
orthoMCL 1 0.900 - - OOG6_101475
Panther 1 1.100 - - LDO PTHR11918
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4103
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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