DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6550 and Cdkal1

DIOPT Version :9

Sequence 1:NP_611207.1 Gene:CG6550 / 36954 FlyBaseID:FBgn0034214 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_653119.1 Gene:Cdkal1 / 68916 MGIID:1921765 Length:578 Species:Mus musculus


Alignment Length:495 Identity:314/495 - (63%)
Similarity:394/495 - (79%) Gaps:7/495 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 VDDIEDLISADDVKPRERYENKKTVTVRAKKRSQIRLESQEEEEKPKPTIHESVIPGTQKVFVKT 77
            :|||||:||.:|.||::|..::|.|..:.::|:    ..:..:|:|:|. .:|.|||.||::::|
Mouse    10 LDDIEDIISQEDSKPQDRQFSRKHVFPKVRRRN----TQKYLQEEPRPP-SDSTIPGIQKIWIRT 69

  Fly    78 WGCAHNNSDSEYMAGQLAAYGYRLS-GKEEADLWLLNSCTVKNPSEDTFRNEIESGMRNGKHVVV 141
            |||:|||||.||||||||||||::: ...:||||||||||||||:||.|||.|:......|.||:
Mouse    70 WGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKVVL 134

  Fly   142 AGCVPQGAPKSDYLNGLSVIGVQQIDRVVEVVEETLKGHSVQLLQNKKKVHGRRVAGAPLSLPKV 206
            ||||||..|:.|||.|||:||||||||||||||||:|||||:|| .:||.:|:|:.||.|.|||:
Mouse   135 AGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLL-GQKKDNGKRLGGARLDLPKI 198

  Fly   207 RKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAYG 271
            ||||||||||||:||||.|||||||||||:|||||.:|:||||:|||.||.||||||||||||||
Mouse   199 RKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYG 263

  Fly   272 RDIGSSLPELLWQLVEVIPEHCMLRVGMTNPPYILEHLEEVANVLQHPRVYSFLHVPVQSGSDSV 336
            ||||:.||.|||:|||||||..|||:||||||||||||||:|.:|.|||||:|||:||||.||||
Mouse   264 RDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSV 328

  Fly   337 LGEMKREYCRQDFEHVVDFLRERVPGVTIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQF 401
            |.:||||||..||:.|||||:|:|||:|||||||||||.||:.||:||:.|..:|:|||||||||
Mouse   329 LMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQF 393

  Fly   402 FPRPGTPAAKMDRIPANLVKKRTKRLTDLFYSYEPYADRVGEIYTVLVTEVSHDKLHYVGHNKSY 466
            :|||||||||.:::||::.|:|||.|:.:|:||.||..::||...|||||.|.|...||.||:.|
Mouse   394 YPRPGTPAAKAEQVPAHVKKQRTKDLSRVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFY 458

  Fly   467 EQVLLPMRDNLLGTRVHVRITSASKFSMVGEILDDERDWT 506
            ||||:|.....:|..|.|.|..:.|..:.|:.:.:.|.:|
Mouse   459 EQVLVPKNPAFMGKMVEVDIYESGKHFLKGQPVSETRVYT 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6550NP_611207.1 MiaB-like-B 72..549 CDD:273703 292/436 (67%)
UPF0004 72..151 CDD:279287 51/79 (65%)
Radical_SAM 215..413 CDD:100105 154/197 (78%)
Cdkal1NP_653119.1 MiaB-like-B 64..491 CDD:273703 290/427 (68%)
UPF0004 64..145 CDD:279287 52/80 (65%)
Radical_SAM 207..410 CDD:100105 155/202 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849718
Domainoid 1 1.000 289 1.000 Domainoid score I1548
eggNOG 1 0.900 - - E1_COG0621
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9830
Inparanoid 1 1.050 648 1.000 Inparanoid score I788
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62224
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005706
OrthoInspector 1 1.000 - - oto93782
orthoMCL 1 0.900 - - OOG6_101475
Panther 1 1.100 - - LDO PTHR11918
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2445
SonicParanoid 1 1.000 - - X4103
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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