Protein Alignment CG6550 and cdk5rap1

DIOPT Version :9

• Sequence 1: NP_611207.1
• Gene: CG6550 / 36954
• FlyBaseID: FBgn0034214
• Length: 552
• Species: Drosophila melanogaster
• Sequence 2: NP_001103849.1
• Gene: cdk5rap1 / 558659
• ZFINID: ZDB-GENE-070424-90
• Length: 577
• Species: Danio rerio
• Alignment Length: 559
• Identity: 140/559 - (25%)
• Similarity: 237/559 - (42%)
• Gaps: 152/559 - (27%)

  Fly    51 SQEEEEKPKPTIHESVIPGTQKVFVKTWGCAHNNSDSEYMAGQLAAYGY-RLSGKEEADLWLLNS 114
            |:|.||...|   :::...::||:.:|:||..|.:|:|.....|...|| |....::||:.||.:
Zfish    73 SEEYEEHYIP---KNMSDHSRKVYFETYGCQMNTNDTEIAWSILQKAGYSRTLELQKADVVLLVT 134

  Fly   115 CTVKNPSEDTFRNEIE----SGMRNGKH-----VVVAGCVPQGAPKSDYLNGLSVIGV------- 163
            |:::..:|.|..|.::    |..|..||     :.|.||:.:.. ||:.|:...::.|
Zfish   135 CSIREKAEQTIWNRLKHLTASKKRIQKHKRSLTIGVLGCMAERL-KSELLDQEKLVDVLAGPDAY 198

  Fly   164 QQIDRVVEV-----------------------VEETLKGHSVQLLQNKKKVHGRRVAGAPLSLPK 205
            :.:.|::.:                       |.:||:|||.
Zfish   199 RDLPRLLSLAHGGQRASNVLLSLEETYADVIPVHQTLEGHSA----------------------- 240

  Fly   206 VRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEVVERARQSFAEGCCEIWLTSEDTGAY 270
                    .:||..||.|.|:||.....||...|.|...:||..|....:|..||.|..::..:|
Zfish   241 --------FVSIMRGCDNMCSYCIVPFTRGRERSRPMSSIVEEVRMLSDQGVKEITLLGQNVNSY 297

  Fly   271 GRDI---------------------------GSSLPELLWQLVEVIPEHCMLRVGMTN------P 302
             ||:                           |....:||.::..:.|.   :|:..|:      |
Zfish   298 -RDLSKMQFSCSERNTQLSRGFQSVYRTKQGGLRFADLLDRVSLINPN---MRIRFTSPHPKDFP 358

  Fly   303 PYILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRERVPGVTIAT 367
            ..:|:.::|.:|:.:|      ||:||||||..:|..|:|.|.|:.:..:|:.:|:.:|||::::
Zfish   359 DEVLQLIQERSNICKH------LHLPVQSGSSRILHAMRRGYTREAYLELVENIRKIIPGVSLSS 417

  Fly   368 DIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFPRPGTPAAKM--DRIPANLVKKRTKRLTDL 430
            |.|.||.:|||:|.::|::|..:..:...|...:..|..|.|...  |.:||.:.|:|.:.|..:
Zfish   418 DFIAGFCSETEEDHQQTISLLKEVGYNIGFFFTYSMRKKTHAYHRLEDNVPAPVKKRRLEELISV 482

  Fly   431 FYSYEPYADR--VGEIYTVLV---TEVSHDKLHYVGHNKSYEQVLLPMRDNL------------- 477
            |.......:.  :|....|||   ::.|.::|  .|.|....:|:.| :.||
Zfish   483 FREKATKVNMTLIGNTQLVLVEGKSKRSSEEL--CGRNDGNVKVIFP-KTNLPVQPEKTQMACIT 544

  Fly   478 LGTRVHVRITSASKFSMVGEILDDERDWTRCAKNQELPN 516
            .|..|.|:||||:..|:.|..|           |...||
Zfish   545 PGDYVLVKITSANSQSLRGHAL-----------NHSSPN 572

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG6550	NP_611207.1	MiaB-like-B	72..549	CDD:273703	135/538 (25%)
		UPF0004	72..151	CDD:279287	27/88 (31%)
		Radical_SAM	215..413	CDD:100105	65/232 (28%)
cdk5rap1	NP_001103849.1	PRK14329	66..567	CDD:237676	137/552 (25%)
		UPF0004	91..194	CDD:279287	31/103 (30%)
		TRAM	493..566	CDD:280171	21/75 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0621
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D407532at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.820