DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6550 and F25B5.5

DIOPT Version :10

Sequence 1:NP_611207.1 Gene:CG6550 / 36954 FlyBaseID:FBgn0034214 Length:552 Species:Drosophila melanogaster
Sequence 2:NP_498290.1 Gene:F25B5.5 / 175841 WormBaseID:WBGene00017776 Length:547 Species:Caenorhabditis elegans


Alignment Length:498 Identity:121/498 - (24%)
Similarity:215/498 - (43%) Gaps:87/498 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 VKPRERYENKKTVTVRAKKRSQIRLESQEEE---------EKPKPTIHESVIPGT-QKVFVKTWG 79
            |||      |:.:.....:.|....||.:::         |..|..::...:.|. :.|...|:|
 Worm    29 VKP------KRAIPTDGLQLSDFIKESTKKQRQKAIIPSIEDTKEYLNPEDLQGNGRTVCYVTYG 87

  Fly    80 CAHNNSDSEYMAGQLAAYGYRLSGKEE-ADLWLLNSCTVKNPSEDTFRNEIE----SGMRNGKHV 139
            |..|.||.|.:...:..||:..|.|:| ||:.||.:|::::.:|....|:::    :.:..|:.|
 Worm    88 CQMNVSDMEIVRSIMTKYGFVESDKKENADIVLLMTCSIRDGAEKKVWNQLKLIRSNSVNKGQIV 152

  Fly   140 VVAGCVPQGAPKSDYLNGLSVIGV-------QQIDRVVEVVEETLKGHSVQLLQNKKKVHGRRVA 197
            .|.||:.:.. :.|.|...:::.:       :.:.|:|.|......|.:|||..::.....:   
 Worm   153 GVLGCMAERV-RHDLLEKRNLVNIVAGPDSYRDLPRLVAVAAGGSNGINVQLSLDETYADVQ--- 213

  Fly   198 GAPLSLPKVRKNPLIEIISINSGCLNQCTYCKTKHARGDLASYPPEEVVERARQSFAEGCCEIWL 262
              |:.:....|.   ..|||..||.|.||||.....||...|.|.|.:||..::...:|..::.|
 Worm   214 --PIRVDSASKT---AFISIMRGCDNMCTYCVVPFTRGRERSRPIESIVEEVQRLRDQGYKQVTL 273

  Fly   263 TSEDTGAYGRDI-----------------------------GSSLPELLWQLVEVIPEHCMLRVG 298
            ..::..:| ||:                             |.:...||.::.:..|:   :|..
 Worm   274 LGQNVNSY-RDMTSMDFSMAPSTSQEDRVPGFKTVYKPKSGGLTFTTLLEKVADAAPD---IRFR 334

  Fly   299 MTNP---PYILEHLEEVANVLQHPRVYSFLHVPVQSGSDSVLGEMKREYCRQDFEHVVDFLRERV 360
            .|:|   .:.::.:|.:|:   .|.:...||:|.|||.|..|..|:|.|.|..:..:||.:|..:
 Worm   335 FTSPHPKDFPMQLIELIAS---RPNLCKQLHLPAQSGDDETLERMERGYTRDLYLRLVDDIRHVL 396

  Fly   361 PGVTIATDIICGFPTETEDDFEETMTLCAKYRFPSLFINQFFPRPGTPA--AKMDRIPANLVKKR 423
            |.|::.:|.|.||..|||...:.|::|....|:...|:..:..|..|.|  ...|.:|.::..:|
 Worm   397 PSVSLTSDFIAGFCGETEQAHQNTLSLIRAVRYSFCFVFPYSMRGKTRAHHRLTDDVPEDVKARR 461

  Fly   424 TKRLTDLFYSYEPYADR--VGEIYTVLV-------TEVSHDKL 457
            ...||.:|.......::  :|...|||:       ...||.::
 Worm   462 HLDLTTVFREEALKLNQALIGSEQTVLLEGKSKRDASFSHGRI 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6550NP_611207.1 MiaB-like-B 72..549 CDD:273703 111/441 (25%)
F25B5.5NP_498290.1 MiaB 78..543 CDD:440386 111/443 (25%)

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