DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)k01209 and nmrk-1

DIOPT Version :10

Sequence 1:NP_725672.2 Gene:l(2)k01209 / 36953 FlyBaseID:FBgn0022029 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_491763.1 Gene:nmrk-1 / 188966 WormBaseID:WBGene00020842 Length:340 Species:Caenorhabditis elegans


Alignment Length:269 Identity:57/269 - (21%)
Similarity:103/269 - (38%) Gaps:63/269 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FVIGICGGSASGKTTVAEKIIESLDVPWVTLLSMDCFYKILNEKQ---HEQA--LINE---YNFD 243
            :|:.:.|.:.|||:|:|::..........|:::.|.|||..||.:   |..|  |.:|   ::||
 Worm     7 YVLALAGCTNSGKSTLAKEFQRFFGAGETTIINQDEFYKTENEVEKIYHPDAEHLTDEGYYWSFD 71

  Fly   244 HPDAFDIELLLDVLTKLKEGRKVEVPVYNFVTHGRESQTKTMYGANVIIFEGILTFHSPEVLKLL 308
            ..:|.:|:       :.::....|..||.                |||| :|.:.....|::.|.
 Worm    72 EKEAINID-------QFRQRILNESKVYK----------------NVII-DGNMITEMDEIVDLC 112

  Fly   309 DMKIFVDTD-PDIRLARRLRRDISQRGRDLKGVLKQYLNMVKPSYCNYIA---------PTMAHA 363
            |..:.:..| ...:..|..|.|...  .|..|   .::|:..|:|..::.         ..:...
 Worm   113 DRIVVMTLDFKTCKRRREARTDYVP--ADTPG---YFVNVAFPAYVRHLERARQRSRTDSRLTFI 172

  Fly   364 DIIVPRGGD-NKVAIHLIVQHVHTQLQLRGFKLRETLANSYKDQPMPHSLHLLHPTPQIKGLHTF 427
            |:...:..| ||..::...|.:...::|..    |.:.....||.:.|        |....:.||
 Worm   173 DVSESKFDDKNKSIVNFRQQILDDHIKLTD----EVIDVKVVDQLVSH--------PSCGAISTF 225

  Fly   428 IRCRNTSRD 436
               ...:||
 Worm   226 ---NGVTRD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k01209NP_725672.2 UMPK 188..387 CDD:238981 47/217 (22%)
UPRTase 417..620 CDD:434124 5/20 (25%)
nmrk-1NP_491763.1 NRK1 8..163 CDD:238982 42/183 (23%)
MoaE 205..332 CDD:238385 8/38 (21%)

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