DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k01209 and nmrk-1

DIOPT Version :9

Sequence 1:NP_725672.2 Gene:l(2)k01209 / 36953 FlyBaseID:FBgn0022029 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_491763.1 Gene:nmrk-1 / 188966 WormBaseID:WBGene00020842 Length:340 Species:Caenorhabditis elegans


Alignment Length:269 Identity:57/269 - (21%)
Similarity:103/269 - (38%) Gaps:63/269 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FVIGICGGSASGKTTVAEKIIESLDVPWVTLLSMDCFYKILNEKQ---HEQA--LINE---YNFD 243
            :|:.:.|.:.|||:|:|::..........|:::.|.|||..||.:   |..|  |.:|   ::||
 Worm     7 YVLALAGCTNSGKSTLAKEFQRFFGAGETTIINQDEFYKTENEVEKIYHPDAEHLTDEGYYWSFD 71

  Fly   244 HPDAFDIELLLDVLTKLKEGRKVEVPVYNFVTHGRESQTKTMYGANVIIFEGILTFHSPEVLKLL 308
            ..:|.:|:       :.::....|..||.                |||| :|.:.....|::.|.
 Worm    72 EKEAINID-------QFRQRILNESKVYK----------------NVII-DGNMITEMDEIVDLC 112

  Fly   309 DMKIFVDTD-PDIRLARRLRRDISQRGRDLKGVLKQYLNMVKPSYCNYIA---------PTMAHA 363
            |..:.:..| ...:..|..|.|...  .|..|   .::|:..|:|..::.         ..:...
 Worm   113 DRIVVMTLDFKTCKRRREARTDYVP--ADTPG---YFVNVAFPAYVRHLERARQRSRTDSRLTFI 172

  Fly   364 DIIVPRGGD-NKVAIHLIVQHVHTQLQLRGFKLRETLANSYKDQPMPHSLHLLHPTPQIKGLHTF 427
            |:...:..| ||..::...|.:...::|..    |.:.....||.:.|        |....:.||
 Worm   173 DVSESKFDDKNKSIVNFRQQILDDHIKLTD----EVIDVKVVDQLVSH--------PSCGAISTF 225

  Fly   428 IRCRNTSRD 436
               ...:||
 Worm   226 ---NGVTRD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k01209NP_725672.2 Udk 186..397 CDD:223645 48/228 (21%)
UMPK 188..387 CDD:238981 47/217 (22%)
UPRTase 417..620 CDD:291353 5/20 (25%)
nmrk-1NP_491763.1 NRK1 8..163 CDD:238982 42/183 (23%)
MoaE 205..332 CDD:238385 8/38 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.