DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)k01209 and bar-1

DIOPT Version :9

Sequence 1:NP_725672.2 Gene:l(2)k01209 / 36953 FlyBaseID:FBgn0022029 Length:626 Species:Drosophila melanogaster
Sequence 2:NP_509206.1 Gene:bar-1 / 180982 WormBaseID:WBGene00000238 Length:811 Species:Caenorhabditis elegans


Alignment Length:425 Identity:86/425 - (20%)
Similarity:144/425 - (33%) Gaps:142/425 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   243 DHPDAFDIELLLDVLTKLKEGRKVEVPVY------NFVTHGRESQTKTMYGAN-VIIFEGILTFH 300
            |.|.....:|||..|.:|...|...:.:|      |.|.:.|.:: :.|.|.| |:|....||..
 Worm   370 DVPSKIKEDLLLKSLLELVNSRNTTIRLYSAQIMSNLVANNRHNK-EFMCGNNGVVILVRALTIA 433

  Fly   301 SPEVLKLLD-----------------------------MKIFVDTDPDIRLARRLRRDISQRGRD 336
            :.|:..|.|                             ::.||..||    |..|.:.::.|...
 Worm   434 TKEMGDLRDKEAQQMEDYIESLICTLRHLCVGHPMSDKVQAFVFRDP----ALFLHKLLTMRPVL 494

  Fly   337 LKGVLKQYLNMVKPSYCNYIAPTMAHADIIVP----RGGDN---KVAIHLI---VQHVHTQLQLR 391
            ||..|...|.:|.           .|| ::.|    |.||.   :..||::   ...::.|..:.
 Worm   495 LKHTLSLLLKVVS-----------QHA-LLAPFRSCRIGDKGFVEQLIHILRVACTQLNVQESIE 547

  Fly   392 GFKLRETLANSYKDQPMPHSLHLLHPTPQIKGLHTFIRCRNTSRDE-------FIFYSKRLIRLV 449
            |.::::                ::|...||        .|..:||:       |...:....|:.
 Worm   548 GVRVKD----------------IIHLCIQI--------LRWITRDQDILNEVVFFLQTPENSRMG 588

  Fly   450 IEYALSLFPFKKTTVETPQGVLYEGKRMESRKICGVSILRAGETMEQAVCDVCKDIRIGKIL--I 512
            ..:.|.:|..:|..||            |:.|...::::......||....:.:|..:.|:|  :
 Worm   589 DGHTLPIFVLQKANVE------------ENTKSSALALIYNLMHHEQMANVLDRDDVLVKMLQNV 641

  Fly   513 QTNLKTGEPELYYLRLPKDIKDYKVILMDATVATGAAAMM-AIRVLLDHDVPEDNIILASLLMAE 576
            |...:| .|||                  |::|.....|| ..|....:.:|..|    |.|.::
 Worm   642 QMQSQT-HPEL------------------ASLANNILKMMYEKREKTRNTLPRYN----SYLESQ 683

  Fly   577 IGVHSIAYAFPKVKIVTSALDPEINSKFYVIPGIG 611
            .|..|          :|:.....:||...|..|.|
 Worm   684 FGHMS----------MTTPRSEALNSSGEVCEGAG 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)k01209NP_725672.2 Udk 186..397 CDD:223645 44/199 (22%)
UMPK 188..387 CDD:238981 42/189 (22%)
UPRTase 417..620 CDD:291353 41/205 (20%)
bar-1NP_509206.1 armadillo repeat 120..145 CDD:293788
armadillo repeat 155..195 CDD:293788
armadillo repeat 201..240 CDD:293788
armadillo repeat 294..331 CDD:293788
ARM 296..408 CDD:237987 10/37 (27%)
armadillo repeat 337..368 CDD:293788
Extensin_2 739..796 CDD:252669
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0572
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.