DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PRE1

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_010928.1 Gene:PRE1 / 856731 SGDID:S000000814 Length:198 Species:Saccharomyces cerevisiae


Alignment Length:178 Identity:45/178 - (25%)
Similarity:78/178 - (43%) Gaps:13/178 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IGICTPEGVVLAVEKRITSPLMV-PSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWF 101
            :||...:.|:||..|.:|..:.| ..:.:|..::..|...:.:|...|.....|..:...|    
Yeast     5 LGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQANIQ---- 65

  Fly   102 VYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQLWHMDPSGTF 164
            :|:.|...|...||||:...|     :...:....||:.|.:|..|.:  ..:|:|:.:|..||.
Yeast    66 LYSIREDYELSPQAVSSFVRQ-----ELAKSIRSRRPYQVNVLIGGYDKKKNKPELYQIDYLGTK 125

  Fly   165 VRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKL 212
            |.....|.|.........|...:|||:|.:|.:|: |....|.:|:::
Yeast   126 VELPYGAHGYSGFYTFSLLDHHYRPDMTTEEGLDL-LKLCVQELEKRM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 45/178 (25%)
proteasome_alpha_type_5 8..222 CDD:239722 45/178 (25%)
PRE1NP_010928.1 proteasome_beta_type_2 1..194 CDD:239727 45/178 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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