DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PAA1

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:242 Identity:80/242 - (33%)
Similarity:129/242 - (53%) Gaps:12/242 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIK-LGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
            |||.:..|||||||||||||.:|:| .|.|:||:...:.|.:..:|::...|:..|:|..:..:.
plant     9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPIT 73

  Fly    72 KHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMS 136
            |:||...:|:.||||:|:::||.:.....|.|...|.::..|:.::       |........|..
plant    74 KYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIA-------DKSQVYTQHAYM 131

  Fly   137 RPFGVAILFAGI-EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFR--PDLTLDEAID 198
            ||.||..:..|: |...|.|:..||:|.|..|.|.:.|...:.|...|:...:  |..|.||.:.
plant   132 RPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQ 196

  Fly   199 ISLNTLKQVMEEKLNSTNVEVMTMTKER-EFYMFTKEEVEQHIKNIA 244
            .:::.|:.|::|...:|.:||..:..|. ||...|.||:|:|:..|:
plant   197 TAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLTAIS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 79/239 (33%)
proteasome_alpha_type_5 8..222 CDD:239722 71/217 (33%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 71/217 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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