DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PBD2

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001190731.1 Gene:PBD2 / 827135 AraportID:AT4G14800 Length:215 Species:Arabidopsis thaliana


Alignment Length:394 Identity:76/394 - (19%)
Similarity:118/394 - (29%) Gaps:131/394 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   484 DKIFRKLSRHDPKRRTREQLLHDYGKDVRKRREKEEQTI-----EETTVEDAGGCSKAVQKEDD- 542
            ||||..:|...|.:.|.|:|...|       :|..||.:     .|.|....|..:|:||:|.. 
plant   238 DKIFEAISSMFPDKGTLEELKEKY-------KELTEQQLPGALPPECTPNIDGPNAKSVQREQSL 295

  Fly   543 -------------------------NVY--------DDVSPCSEKDESPPQLDRSIGLVEVFEET 574
                                     |.|        :|..||...            ..::.|..
plant   296 HSFHTLFCRRCFKYDCFLHPFHATPNTYKRKNNEAANDGKPCGPH------------CYQLLEGA 348

  Fly   575 KHPAAPVGSSNVSEGSVKASPSGSNEG----NNVRHSTTSTGGLVSIENSSHRTVSSLPVSAGTT 635
            :..||.:.:..:.  :....|||...|    |..|.||.:...|.:.:..|.|...:........
plant   349 REFAAALTAERIK--TPPKRPSGRRRGRLPNNTSRPSTPTVNVLEAKDTDSDREAGTETGGESND 411

  Fly   636 KENPPRK---LSAPEPRDR-RVRKAMQEYLRPMTHSE--------------VEYENFKQLQQLNQ 682
            ||...:|   .|:.|...| :....|:..:.|..:.|              ..|:||..:.:|..
plant   412 KEEEEKKDETSSSSEANSRCQTPIKMKPNIEPPENVEWSGAEASLFRVLIGTYYDNFCAIARLIG 476

  Fly   683 ERAHDPQLAKIDREIEQLLVKKMLLLNPGSTVTAEPTLPANAHTAAPTALPSERSGTVYTSVHDP 747
                    .|..|::.:..||:..::.|   |.||                              
plant   477 --------TKTCRQVYEFRVKESSIIAP---VIAE------------------------------ 500

  Fly   748 VSADSSCSKNSTASTAWNSHYHMAKVIKNRSKLET----PVELTTTPSDVSIPTFIKQKQDKFVE 808
             ..|:...|.......|.:|....::.|:.|....    |.:....|.|.|.|..|.|   .|.|
plant   501 -DVDTPPRKKKRKHRLWAAHCRKIQLKKDGSSNHVYNYQPCDHPRQPCDSSCPCVIAQ---NFCE 561

  Fly   809 NYDQ 812
            .:.|
plant   562 KFCQ 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722
PBD2NP_001190731.1 proteasome_beta_type_2 1..206 CDD:239727
Blue background indicates that the domain is not in the aligned region.

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