DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psmb11

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:173 Identity:42/173 - (24%)
Similarity:72/173 - (41%) Gaps:22/173 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRIT--SPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVEC 96
            |:|.:......||:.|.:.|.:  |.:..|:: .|::.|.:.:...|||..||..|.....|.|.
Mouse    49 GTTTLAFRFRHGVIAAADTRSSCGSYVACPAS-RKVIPVHQRLLGTTSGTSADCATWYRVLRREL 112

  Fly    97 QNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFG----VAILFAGIEAGQPQLWH 157
            :.......:..|:...|:.:               ||.||...|    ||....|.:...|.|::
Mouse   113 RLRELREGQLPSVAGTAKLL---------------AAMMSCYRGLDLCVATALCGWDHSGPALFY 162

  Fly   158 MDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDIS 200
            :...||.::....::||||..|...|...:..|:|:.||..::
Mouse   163 VYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLA 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 42/173 (24%)
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730 41/172 (24%)

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