DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psmb3

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001123295.1 Gene:psmb3 / 573095 ZFINID:ZDB-GENE-040426-2682 Length:205 Species:Danio rerio


Alignment Length:200 Identity:38/200 - (19%)
Similarity:80/200 - (40%) Gaps:20/200 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRI-TSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQ 97
            |...:.:...|.|.:|.::|. ....:|.:..:||..:.:.:....:||..|.:|:.:|.:....
Zfish     8 GGAVMAMRGKECVAIASDRRFGIQAQLVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRLKFRLN 72

  Fly    98 NHWFVYNERMSIESCAQAVSTLAIQ--FGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQLWHM 158
            .:......::...:....||.|..:  ||             |:.:..:.||::  ..:|.:..:
Zfish    73 LYELKEGRQIKPRTFMSMVSNLLYERRFG-------------PYYIEPVIAGLDPKTFEPFICSL 124

  Fly   159 DPSG-TFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAID-ISLNTLKQVMEEKLNSTNVEVMT 221
            |..| ..|.......|:.||......:.|:.||:..::..: ||...|..|..:.::...|.|..
Zfish   125 DLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDMKPEDLFETISQAMLNAVDRDAVSGMGVVVHV 189

  Fly   222 MTKER 226
            :.|::
Zfish   190 IEKDK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 38/199 (19%)
proteasome_alpha_type_5 8..222 CDD:239722 37/194 (19%)
psmb3NP_001123295.1 PRE1 3..198 CDD:223711 38/199 (19%)
proteasome_beta_type_3 6..201 CDD:239728 38/199 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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