DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PSMB3

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002786.2 Gene:PSMB3 / 5691 HGNCID:9540 Length:205 Species:Homo sapiens


Alignment Length:188 Identity:35/188 - (18%)
Similarity:73/188 - (38%) Gaps:20/188 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VVLAVEKRI-TSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSI 109
            |.:|.::|. ....||.:..:||..:...:....:||..|.:|:.:|.:.....:......::..
Human    20 VAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKP 84

  Fly   110 ESCAQAVSTLAIQ--FGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQLWHMDPSG-TFVRHGA 169
            .:....|:.|..:  ||             |:....:.||::  ..:|.:..:|..| ..|....
Human    85 YTLMSMVANLLYEKRFG-------------PYYTEPVIAGLDPKTFKPFICSLDLIGCPMVTDDF 136

  Fly   170 KAIGSGSEGAQQNLQDLFRPDLTLDEAID-ISLNTLKQVMEEKLNSTNVEVMTMTKER 226
            ...|:.:|......:.|:.|::..|...: ||...|..|..:.::...|.|..:.|::
Human   137 VVSGTCAEQMYGMCESLWEPNMDPDHLFETISQAMLNAVDRDAVSGMGVIVHIIEKDK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 34/182 (19%)
PSMB3NP_002786.2 proteasome_beta_type_3 6..201 CDD:239728 35/188 (19%)

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