DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PSMB1

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:237 Identity:58/237 - (24%)
Similarity:93/237 - (39%) Gaps:72/237 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRIT---------SPLMVPSTVEKIVEVDKHIGCATSGLMADARTL- 88
            |.|.:.|...:..::|.:.|::         ||.....| :|.|     |||  ||...|..|| 
Human    37 GGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLT-DKTV-----IGC--SGFHGDCLTLT 93

  Fly    89 -IERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR---PFGVAILFAGI- 148
             |..||::...|  ..|:.|:..:.|..:||:              ..||   |:.|..:..|: 
Human    94 KIIEARLKMYKH--SNNKAMTTGAIAAMLSTI--------------LYSRRFFPYYVYNIIGGLD 142

  Fly   149 EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQ---------QNLQDLFRPDLTLDEAIDISLNTL 204
            |.|:..::..||.|::.|...||.||.|...|         :|:|::....|:||.|    :..:
Human   143 EEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRA----MRLV 203

  Fly   205 KQVMEEKLNSTNVEVMTMTKEREFY--------MFTKEEVEQ 238
            |            :|.....||:.|        :.|||.:.:
Human   204 K------------DVFISAAERDVYTGDALRICIVTKEGIRE 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 52/211 (25%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 58/237 (24%)

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