DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha5 and PSMA2

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002778.1 Gene:PSMA2 / 5683 HGNCID:9531 Length:234 Species:Homo sapiens


Alignment Length:237 Identity:83/237 - (35%)
Similarity:126/237 - (53%) Gaps:8/237 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDK 72
            |...:.||||.|:|.|:|||:.|:..|:.::||....|||||.||:..|.|....:|.|:..:.|
Human     6 YSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPITK 70

  Fly    73 HIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR 137
            |||...||:..|.|.|:.|||...|.::.||.|.:......|.|:::..::..||.       .|
Human    71 HIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG-------VR 128

  Fly   138 PFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLN 202
            ||||::|..|...|:|.|:..||||.:....|.|:|......:..|:..:..||.|::||..::.
Human   129 PFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAIL 193

  Fly   203 TLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNIA 244
            |||:..|.::...|:|| .:..|..|...|..||:.::..||
Human   194 TLKESFEGQMTEDNIEV-GICNEAGFRRLTPTEVKDYLAAIA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 76/213 (36%)
PSMA2NP_002778.1 proteasome_alpha_type_2 6..231 CDD:239719 81/232 (35%)

Return to query results.
Submit another query.