DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and PSMA1

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_683877.1 Gene:PSMA1 / 5682 HGNCID:9530 Length:269 Species:Homo sapiens


Alignment Length:243 Identity:75/243 - (30%)
Similarity:123/243 - (50%) Gaps:13/243 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVE 69
            |::||..|..:||:||:.|:|||:||:|.||..:|:.:....||...||..|.|....  :||:.
Human     9 RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--KKILH 71

  Fly    70 VDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAA 134
            ||.|||.:.:||.||||.|....|.||.:..||::..:       .||.|....|..........
Human    72 VDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPL-------PVSRLVSLIGSKTQIPTQRY 129

  Fly   135 MSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRP--DLTLDEAI 197
            ..||:||.:|.||.:...|.::...||..:....|.:||:.|:.|:..|:.....  :..|:|.:
Human   130 GRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELV 194

  Fly   198 DISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            ...|..|::.:  |:.|.:.||.:..:.|:.||.::..::|...::.:
Human   195 KHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 70/217 (32%)
PSMA1NP_683877.1 proteasome_alpha_type_1 12..222 CDD:239718 70/218 (32%)

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