DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma2a

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001019612.1 Gene:psma2a / 554153 ZFINID:ZDB-GENE-050522-479 Length:234 Species:Danio rerio


Alignment Length:237 Identity:83/237 - (35%)
Similarity:127/237 - (53%) Gaps:8/237 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDK 72
            |...:.||||.|:|.|:|||:.|:..|:.::||....|||||.||:..|.|....:|.|:..:.|
Zfish     6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKVEPITK 70

  Fly    73 HIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR 137
            |||...||:..|.|.|:.|||...|.::.||.|.:......|.|:::..::..||.       .|
Zfish    71 HIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGG-------VR 128

  Fly   138 PFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLN 202
            ||||::|.||.:..:|.|:..||||.:....|.|:|......:..|:..:..||.|::||..::.
Zfish   129 PFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAIL 193

  Fly   203 TLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNIA 244
            |||:..|.::...|:|| .:..|..|...|..||:.::..||
Zfish   194 TLKESFEGQMTEDNIEV-GICNEAGFRRLTPAEVKDYLAAIA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 76/213 (36%)
psma2aNP_001019612.1 proteasome_alpha_type_2 6..231 CDD:239719 81/232 (35%)

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