DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma2

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001016382.1 Gene:psma2 / 549136 XenbaseID:XB-GENE-964711 Length:234 Species:Xenopus tropicalis


Alignment Length:237 Identity:83/237 - (35%)
Similarity:127/237 - (53%) Gaps:8/237 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDK 72
            |...:.||||.|:|.|:|||:.|:..|:.::||....|||||.||:..|.|....:..|:..:.|
 Frog     6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITK 70

  Fly    73 HIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR 137
            |||...||:..|.|.|:.|||...|.::.||.|.:......|.|:::..::..||.       .|
 Frog    71 HIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGG-------VR 128

  Fly   138 PFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLN 202
            ||||::|.||.:.|:|.|:..||||.:....|.|:|......:..|:..:..||.|::||..::.
 Frog   129 PFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAIL 193

  Fly   203 TLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNIA 244
            |||:..|.::...|:|| .:..|..|...|..||:.::..||
 Frog   194 TLKESFEGQMTEDNIEV-GICNEAGFKRLTPAEVKDYLAAIA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 81/234 (35%)
proteasome_alpha_type_5 8..222 CDD:239722 76/213 (36%)
psma2NP_001016382.1 proteasome_alpha_type_2 6..231 CDD:239719 81/232 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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