DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma1

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001008159.1 Gene:psma1 / 493521 XenbaseID:XB-GENE-995831 Length:261 Species:Xenopus tropicalis


Alignment Length:247 Identity:79/247 - (31%)
Similarity:126/247 - (51%) Gaps:15/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||  |::||..|..:||:||:.|:|||:||:|.||..:|:.:....||...||..|.|....  :
 Frog     1 MF--RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKSQAVLVALKRAQSELAAHQ--K 61

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||:.||.|:|.:.:||.||||.|....|.||.:..||::..:       .||.|..|.|......
 Frog    62 KILNVDNHVGISIAGLTADARLLCNFMRQECLDSRFVFDRPL-------PVSRLVSQIGSKTQIP 119

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRP--DLTL 193
            ......||:||.:|.||.:...|.::...||..:....|.:||:.|:.|:..|:.....  |..|
 Frog   120 TQRYGRRPYGVGLLIAGYDDMGPHIFQTSPSANYFDCRAMSIGARSQSARTYLERHMSEFLDCNL 184

  Fly   194 DEAIDISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            ::.:...|..|::.:  |:.|.:.||.:..:.||.||.::..:||...::.:
 Frog   185 NDLVKHGLRALRETLPAEQDLTTKNVSIGIVGKEMEFTIYDDDEVAPFLEGL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 76/238 (32%)
proteasome_alpha_type_5 8..222 CDD:239722 70/217 (32%)
psma1NP_001008159.1 proteasome_alpha_type_1 6..216 CDD:239718 70/218 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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