DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma1

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001003427.1 Gene:psma1 / 445033 ZFINID:ZDB-GENE-040801-15 Length:262 Species:Danio rerio


Alignment Length:248 Identity:78/248 - (31%)
Similarity:126/248 - (50%) Gaps:17/248 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||  |::||..|..:||:||:.|:|||:||:|.||..:|:.:....||...||..|.|....  :
Zfish     1 MF--RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSHSHAVLVALKRAQSELAAHQ--K 61

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||:.||.|||.:.:||.||||.|....|.||.:..||::..:       .||.|....|......
Zfish    62 KILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPL-------PVSRLVSLIGSKTQIP 119

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQ---DLFRPDLT 192
            ......||:||.:|.||.:...|.::...||..:....|.:||:.|:.|:..|:   :.|. |..
Zfish   120 TQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARTYLERHMEAFN-DCN 183

  Fly   193 LDEAIDISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            |:..:...|..|::.:  |:.|.:.||.:..:.|:.||.::..::|...::.:
Zfish   184 LNALVQHGLRALRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVATFLQGL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 71/218 (33%)
psma1NP_001003427.1 proteasome_alpha_type_1 6..216 CDD:239718 71/219 (32%)

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