DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psmb2

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001002609.1 Gene:psmb2 / 436882 ZFINID:ZDB-GENE-040718-353 Length:199 Species:Danio rerio


Alignment Length:195 Identity:50/195 - (25%)
Similarity:82/195 - (42%) Gaps:20/195 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IGICTPEGVVLAVEK-RITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWF 101
            |||..|:.|::|.:. ..:|.:.:....:|:.::.:.|.....|...|.....|..:...|    
Zfish     5 IGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQ---- 65

  Fly   102 VYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGI-EAGQPQLWHMDPSGTFV 165
            :|..|...|....|    |..|.....:|...:.: |:.|.:|.||. |...|.|::||......
Zfish    66 LYKMRNGYELSPAA----AANFTRKNLADYLRSRT-PYHVNLLLAGYDETDGPGLYYMDYLSALA 125

  Fly   166 RHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEK-----LNSTNVEVMTMTKE 225
            :....|.|.|:......|...:|||||.:||:|:    ||:.:||.     ||..:..|..:.|:
Zfish   126 KAPFAAHGYGAFLTLSILDRYYRPDLTREEAVDL----LKKCLEELNKRFILNLPSFTVRLIDKD 186

  Fly   226  225
            Zfish   187  186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 49/190 (26%)
psmb2NP_001002609.1 proteasome_beta_type_2 1..192 CDD:239727 50/195 (26%)

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