DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma6b

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:243 Identity:66/243 - (27%)
Similarity:129/243 - (53%) Gaps:14/243 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
            :||.:..|||||||:|||||.:||..|. |::.:...:..::..:|::...|:..|||..:..:.
Zfish     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLFRIT 73

  Fly    72 KHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMS 136
            ::|||..||:.||:|:.::|||.|..|..:.|...:.::...:.::.::..:..:       |..
Zfish    74 ENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQN-------AEM 131

  Fly   137 RPFGVAILFAGI--EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRP--DLTLDEAI 197
            ||.|..::..|:  |.| ||::..||:|.:....|.|.|.....|...|:...:.  |.|.::|:
Zfish   132 RPLGCCMIVIGLDEELG-PQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFEQAV 195

  Fly   198 DISLNTLKQVMEEKLNSTNVEVMTMTKE-REFYMFTKEEVEQHIKNIA 244
            :.::..|..|:......:.:|:..:|.| .:|.:.::.||:.|:.:::
Zfish   196 ETAITCLTTVLSIDFKPSELEIGVITAEDPKFRILSESEVDTHLVSLS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 66/240 (28%)
proteasome_alpha_type_5 8..222 CDD:239722 60/218 (28%)
psma6bNP_001002589.1 PRE1 7..245 CDD:223711 66/243 (27%)
proteasome_alpha_type_6 8..220 CDD:239723 60/218 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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