DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha5 and Prosbeta3

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster


Alignment Length:209 Identity:38/209 - (18%)
Similarity:81/209 - (38%) Gaps:38/209 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRITSPLMVPST-VEKIVEVDKHIGCATSGLMADARTLIERARVECQ 97
            |...:.:...:.|.:|.:.|........|| .:|:..:...:....:||..|..|:.:|.... :
  Fly     8 GGCVVAMRGKDCVAIATDHRFGIQAQTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFR-K 71

  Fly    98 NHWFVYNERMSIESCAQAVSTLAI------QFGDSGDSDGAAAMSRPFGVAILFAGIE--AGQPQ 154
            |   :|..|.:.|.|.:..|.:..      :||             |:.:..:.||::  ..:|.
  Fly    72 N---LYETRENREMCPKPFSAMMSSFLYEHRFG-------------PYFIEPVVAGLDPKTMEPF 120

  Fly   155 LWHMDPSG------TFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVME-EKL 212
            :.:||..|      .||     ..|:.:|......:.|::|||..|:..::...::....: :.:
  Fly   121 ICNMDLIGCPNAPDDFV-----VAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAM 180

  Fly   213 NSTNVEVMTMTKER 226
            :.....|..:.|::
  Fly   181 SGWGATVYIIEKDK 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 37/203 (18%)
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 38/209 (18%)

Return to query results.
Submit another query.