DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Prosbeta2

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster


Alignment Length:201 Identity:39/201 - (19%)
Similarity:85/201 - (42%) Gaps:14/201 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KLGSTAIGICTPEGVVLAVEKRIT-SPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVE 95
            |.|:|.:||...:||:|..:.|.| .|::......||..:.|:|.|..:|..||.....:....:
  Fly    37 KTGTTIVGIIYKDGVILGADTRATEGPIVSDKNCAKIHYLAKNIYCCGAGTAADTEMTTDLISSQ 101

  Fly    96 CQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDP 160
            .:.|....:..:.:.:....:..:..::            ......|::..|::...|.::.:.|
  Fly   102 LELHRLQTDREVRVVAANTMLKQMLFRY------------QGHISAALVLGGVDKTGPHIYSIHP 154

  Fly   161 SGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNS-TNVEVMTMTK 224
            .|:..:.....:||||..|....:..::|||:.:|...:..:.:...:...|.| :|:::..:.|
  Fly   155 HGSSDKLPYATMGSGSLAAMTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRK 219

  Fly   225 EREFYM 230
            ....|:
  Fly   220 GSVEYL 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 37/191 (19%)
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 36/196 (18%)
Pr_beta_C 231..264 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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