DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psma6

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:242 Identity:62/242 - (25%)
Similarity:126/242 - (52%) Gaps:12/242 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
            :||.:..|||||||:|||||.:||..|. |::.:...:..|:..::::...|:..:||..:..:.
 Frog     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSNTVTHLFRIT 73

  Fly    72 KHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMS 136
            :.|||..:|:.||:|:.::|||.|..|..:.|...:.::...:.::.::..:..:       |..
 Frog    74 ESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQN-------AEM 131

  Fly   137 RPFGVAILFAGI-EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRP--DLTLDEAID 198
            ||.|..::..|: |...||::..||:|.:....|...|.....|...|:...:.  |.|.::.::
 Frog   132 RPLGCCMILIGVDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKKLDWTYEQTLE 196

  Fly   199 ISLNTLKQVMEEKLNSTNVEVMTMT-KEREFYMFTKEEVEQHIKNIA 244
            .:::.|..|:......:.:||..:| ::.:|.:.|:.|::.|:..:|
 Frog   197 TAISCLSTVLSIDFKPSELEVGVVTVEDPKFRVLTEAEIDVHLVALA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 61/239 (26%)
proteasome_alpha_type_5 8..222 CDD:239722 56/217 (26%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 56/217 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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