DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha5 and Prosbeta4

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001260511.1 Gene:Prosbeta4 / 34999 FlyBaseID:FBgn0032596 Length:201 Species:Drosophila melanogaster


Alignment Length:212 Identity:43/212 - (20%)
Similarity:81/212 - (38%) Gaps:50/212 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TAIGICTPEGVVLAVE-KRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNH 99
            |.:||..|:.|:||.: ....|.:::.....||.:|...:..:|.|...|.....|         
  Fly     3 TLLGIKGPDFVMLAADTTHARSIIVMKEDQNKIHKVSDSLLISTVGESGDTEQFTE--------- 58

  Fly   100 WFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR-----------PFGVAILFAGIE--AG 151
             |:          ::.::...::.|.......:|..:|           |:.|.:..||.:  ||
  Fly    59 -FI----------SKNIALYKMRNGYDLSPRESAHFTRKNLAEYLRSRTPYQVFMFVAGYDPNAG 112

  Fly   152 QPQLWHMDPSGTFVRHGAKAI-------GSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVME 209
             |:|       ||:.:.|.|:       |.|:..|.......:.|::|..||.|:....:.::.:
  Fly   113 -PEL-------TFIDYLANALPVNYAGHGYGAIFASSIYDRYWHPNITQAEAYDVFKKCIAEIQK 169

  Fly   210 E-KLNSTNVEVMTMTKE 225
            . .:|..|..|..:.|:
  Fly   170 RLVVNLKNFTVAVVDKD 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 43/212 (20%)
proteasome_alpha_type_5 8..222 CDD:239722 42/207 (20%)
Prosbeta4NP_001260511.1 PRE1 1..194 CDD:223711 43/212 (20%)
proteasome_beta_type_2 1..192 CDD:239727 43/212 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440985
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.