DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and psmb8a

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:208 Identity:43/208 - (20%)
Similarity:93/208 - (44%) Gaps:12/208 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCATSGLMADARTLIERARVECQ 97
            |:|.:......||::||:.|.::...:.| ...|::|::.::....||..||.:........||:
Zfish    67 GTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWERLLAKECR 131

  Fly    98 NHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSG 162
            .:.....:|:|:.:.::.:|.:.:.:...|.|.|:           :..|.:...|.|:::|.:|
Zfish   132 LYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGS-----------MICGWDKQGPGLYYVDDNG 185

  Fly   163 TFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLNSTNVEVMTMTKERE 227
            |.:.....:.|.|:..|...:...:|.|:|::||.::....:.........|..|..:...:|..
Zfish   186 TRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDG 250

  Fly   228 FYMFTKEEVEQHI 240
            :....||:|.:.|
Zfish   251 WIKVCKEDVSELI 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 38/188 (20%)
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 38/197 (19%)

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