DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psma5

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_058978.2 Gene:Psma5 / 29672 RGDID:61848 Length:241 Species:Rattus norvegicus


Alignment Length:243 Identity:172/243 - (70%)
Similarity:204/243 - (83%) Gaps:2/243 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||||||||||||||||||||||||||||||||||||||||.|.|||.||||||||||||.||::|
  Rat     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIE 65

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||||:|.|||||.|||:|||:|||::||||.|||||.|||.|::||..||||.||:|||:. |:|
  Rat    66 KIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEE-DAD 129

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDE 195
             ..|||||||||:||.|::...|||:|||||||||:..|:||||.|||||.:||:::...:||.|
  Rat   130 -PGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKE 193

  Fly   196 AIDISLNTLKQVMEEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            ||..||..||||||||||:||:|:.|:...:.|:||||||:|:.||:|
  Rat   194 AIKSSLIILKQVMEEKLNATNIELATVQPGQNFHMFTKEELEEVIKDI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 164/234 (70%)
proteasome_alpha_type_5 8..222 CDD:239722 153/213 (72%)
Psma5NP_058978.2 proteasome_alpha_type_5 8..220 CDD:239722 153/213 (72%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337250
Domainoid 1 1.000 252 1.000 Domainoid score I2029
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2084
Inparanoid 1 1.050 330 1.000 Inparanoid score I2373
OMA 1 1.010 - - QHG54013
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0004131
OrthoInspector 1 1.000 - - oto96037
orthoMCL 1 0.900 - - OOG6_101621
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2875
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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