DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psma1

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_058974.1 Gene:Psma1 / 29668 RGDID:61841 Length:263 Species:Rattus norvegicus


Alignment Length:249 Identity:77/249 - (30%)
Similarity:126/249 - (50%) Gaps:19/249 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||  |::||..|..:||:||:.|:|||:||:|.||..:|:.:....||...||..|.|....  :
  Rat     1 MF--RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--K 61

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||:.||.|||.:.:||.||||.|....|.||.:..||::..:       .||.|....|......
  Rat    62 KILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPL-------PVSRLVSLIGSKTQIP 119

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGA----QQNLQDLFRPDL 191
            ......||:||.:|.||.:...|.::...||..:....|.:||:.|:.|    ::::.:..:  .
  Rat   120 TQRYGRRPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQ--C 182

  Fly   192 TLDEAIDISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            .|||.:...|..|::.:  |:.|.:.||.:..:.|:.||.::..::|...:..:
  Rat   183 NLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 74/240 (31%)
proteasome_alpha_type_5 8..222 CDD:239722 70/219 (32%)
Psma1NP_058974.1 proteasome_alpha_type_1 6..216 CDD:239718 70/220 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 0/5 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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