DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psma6

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_036098.1 Gene:Psma6 / 26443 MGIID:1347006 Length:246 Species:Mus musculus


Alignment Length:246 Identity:67/246 - (27%)
Similarity:131/246 - (53%) Gaps:20/246 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71
            :||.:..|||||||:|||||.:||..|. |::.:...:..|:..:|::...|:..|||..:.::.
Mouse     9 FDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKIT 73

  Fly    72 KHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMS 136
            :.|||..:|:.||:|:.::|||.|..|..:.|...:.::...:.::.::..:..:       |..
Mouse    74 ESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQN-------AEM 131

  Fly   137 RPFGVAILFAGIEAGQ-PQLWHMDPSGTFVRHGAKAIGSG------SEGAQQNLQDLFRPDLTLD 194
            ||.|..::..||:..| ||::..||:|.:.  |.||..:|      :...::.::..|  |.|.:
Mouse   132 RPLGCCMILIGIDEEQGPQVYKCDPAGYYC--GFKATAAGVKQTESTSFLEKKVKKKF--DWTFE 192

  Fly   195 EAIDISLNTLKQVMEEKLNSTNVEVMTMTKER-EFYMFTKEEVEQHIKNIA 244
            :.::.::..|..|:......:.:||..:|.|. :|.:.|:.|::.|:..:|
Mouse   193 QTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLVALA 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 60/221 (27%)
Psma6NP_036098.1 proteasome_alpha_type_6 8..220 CDD:239723 60/221 (27%)

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