DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psma1

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_036095.1 Gene:Psma1 / 26440 MGIID:1347005 Length:263 Species:Mus musculus


Alignment Length:247 Identity:78/247 - (31%)
Similarity:124/247 - (50%) Gaps:15/247 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||  |::||..|..:||:||:.|:|||:||:|.||..:|:.:....||...||..|.|....  :
Mouse     1 MF--RNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ--K 61

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||:.||.|||.:.:||.||||.|....|.||.:..||::..:       .||.|....|......
Mouse    62 KILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPL-------PVSRLVSLIGSKTQIP 119

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRP--DLTL 193
            ......||:||.:|.||.:...|.::...||..:....|.:||:.|:.|:..|:.....  :..|
Mouse   120 TQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNL 184

  Fly   194 DEAIDISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNI 243
            ||.:...|..|::.:  |:.|.:.||.:..:.|:.||.::..::|...:..:
Mouse   185 DELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGL 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 75/238 (32%)
proteasome_alpha_type_5 8..222 CDD:239722 71/217 (33%)
Psma1NP_036095.1 proteasome_alpha_type_1 6..216 CDD:239718 71/218 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 232..263 0/5 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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