DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psmb7

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_035317.1 Gene:Psmb7 / 19177 MGIID:107637 Length:277 Species:Mus musculus


Alignment Length:242 Identity:46/242 - (19%)
Similarity:95/242 - (39%) Gaps:47/242 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 VNTFSP-----------EGRLFQVEYAIEAIKL------GSTAIGICTPEGVVLAVEKRITSPLM 59
            |:.|.|           ...:.:.::|.:..||      |:|..|:...:|:||..:.|.|..::
Mouse     4 VSVFQPPVGGFSFDNCRRNAVLEADFAKKGFKLPKARKTGTTIAGVVYKDGIVLGADTRATEGMV 68

  Fly    60 V-PSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQF 123
            | .....||..:..:|.|..:|..||.....:......:.|.........:.:..:.:..:..::
Mouse    69 VADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRY 133

  Fly   124 GDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFR 188
                        ....|.|::..|::...|.|:.:.|.|:..:.....:||||..|....:|.||
Mouse   134 ------------QGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFR 186

  Fly   189 PDLTLDEAIDISLNTLKQVMEEKL---------NSTNVEVMTMTKER 226
            ||:..:||        |:::.|.:         :.:|:::..::|.:
Mouse   187 PDMEEEEA--------KKLVSEAIAAGIFNDLGSGSNIDLCVISKSK 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 45/236 (19%)
Psmb7NP_035317.1 proteasome_beta_type_7 44..232 CDD:239732 39/202 (19%)
Pr_beta_C 235..271 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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