DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha5 and Psmb5

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:179 Identity:44/179 - (24%)
Similarity:86/179 - (48%) Gaps:22/179 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCATSGLMADA----RTLIERAR 93
            |:|.:......||::|.:.|.|:...:.| ||:|::|::.::....:|..||.    |.|..:.|
Mouse    59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 123

  Fly    94 V-ECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWH 157
            : |.:|     .||:|:.:.::.::.:..|:...|.|.|.           :..|.:...|.|::
Mouse   124 IYELRN-----KERISVAAASKLLANMVYQYKGMGLSMGT-----------MICGWDKRGPGLYY 172

  Fly   158 MDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQ 206
            :|..|..:...|.::||||..|...:...:..||.::||.|::...:.|
Mouse   173 VDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQ 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 44/179 (25%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 43/178 (24%)

Return to query results.
Submit another query.