DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psma3

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:241 Identity:76/241 - (31%)
Similarity:124/241 - (51%) Gaps:14/241 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDK 72
            ||...:||||:||:||||||::|::..||||||...:|||..|||.:.|.|....:.:::..||:
Mouse     8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDR 72

  Fly    73 HIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSR 137
            |:|.|.:||:||||:|.:.||.|..|....:...:.::..|..|:.....:       ...:..|
Mouse    73 HVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAY-------TLYSAVR 130

  Fly   138 PFGVAILFAGIEAGQ-PQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISL 201
            |||.:.:.....|.. .||:.:||||....:...|||...:.|:..::.|...::|..:.:....
Mouse   131 PFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDVVKEVA 195

  Fly   202 NTLKQVMEE-KLNSTNVE---VMTMTKEREFYM--FTKEEVEQHIK 241
            ..:..|.:| |..:..:|   |..:||.|...:  ..:||.|::.|
Mouse   196 KIIYIVHDEVKDKAFELELSWVGELTKGRHEIVPKDIREEAEKYAK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 76/241 (32%)
proteasome_alpha_type_5 8..222 CDD:239722 69/218 (32%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 68/215 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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