DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha5 and pas-6

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:254 Identity:79/254 - (31%)
Similarity:128/254 - (50%) Gaps:27/254 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||  |::||..|..:||:|||.|||||:||:|.||..:||.:....|:...||..:.|  .|..:
 Worm     1 MF--RNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDL--SSHQK 61

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQ-----FGD 125
            |:.|:|.|.|.:.:||::|.|.|....:.||.:..:.|.:.:.|:..|:::. |.:|     :| 
 Worm    62 KVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQ-LKLQANTQYYG- 124

  Fly   126 SGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQ---DLF 187
                      .|||||.||.||.:.....:...|||...|.....:||:.|:.|:..|:   |.|
 Worm   125 ----------RRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNF 179

  Fly   188 RPDLTLDEAIDISLNTLKQVM--EEKLNSTNVEVMTMTKEREFYMFTKEEVEQHIKNIA 244
            ... |.::.|..:|..|:..:  ||.||:.|..:..:.|:..|.:....:|..|:..::
 Worm   180 EKS-TPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQVAVHLNQVS 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 76/244 (31%)
proteasome_alpha_type_5 8..222 CDD:239722 72/223 (32%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 76/247 (31%)
proteasome_alpha_type_1 6..216 CDD:239718 72/224 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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