DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and pas-5

DIOPT Version :9

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:251 Identity:145/251 - (57%)
Similarity:189/251 - (75%) Gaps:11/251 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVE 65
            ||||||||||||||||||||||||||||||:|||||:|||.|.|||:||.|||.||.|||...:|
 Worm     1 MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIE 65

  Fly    66 KIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSD 130
            ||.:||:|||...:||:||:|||:|||::|.||.||.||.::.:|...|:|:.||:||   ||.|
 Worm    66 KISKVDQHIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQF---GDDD 127

  Fly   131 GAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDE 195
            ..|:||||||||:||||::....:|:|:||||||:...||:||:.|:||:|||::.:...||:.|
 Worm   128 VKASMSRPFGVAMLFAGVDQEGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKE 192

  Fly   196 AIDISLNTLKQVMEEKLNSTNVEVMTM-----TKER---EFYMFTKEEVEQHIKNI 243
            .:.::|..|||||||||||.||||:.:     .|.|   ||...:.||::|.|.::
 Worm   193 GLKMALAILKQVMEEKLNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQVITSL 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 PRK03996 8..243 CDD:235192 138/242 (57%)
proteasome_alpha_type_5 8..222 CDD:239722 130/213 (61%)
pas-5NP_492765.1 PRK03996 8..248 CDD:235192 138/242 (57%)
proteasome_alpha_type_5 8..219 CDD:239722 130/213 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157601
Domainoid 1 1.000 214 1.000 Domainoid score I1590
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2084
Inparanoid 1 1.050 276 1.000 Inparanoid score I1781
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54013
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 1 1.000 - - FOG0004131
OrthoInspector 1 1.000 - - oto20543
orthoMCL 1 0.900 - - OOG6_101621
Panther 1 1.100 - - LDO PTHR11599
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1007
SonicParanoid 1 1.000 - - X2875
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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