DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha5 and Psmb8

DIOPT Version :10

Sequence 1:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:207 Identity:50/207 - (24%)
Similarity:94/207 - (45%) Gaps:17/207 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPS-TVEKIVEVDKHIGCATSGLMA 83
            |..|:|.|     .|:|.:......||::||:.|.|:...:.| .:.|::|::.::....||..|
Mouse    63 RNVQIEMA-----HGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAA 122

  Fly    84 DARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGI 148
            |.:........||:.::....||:|:.:.::.:|.:.:|:...|.|.|:           :..|.
Mouse   123 DCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGS-----------MICGW 176

  Fly   149 EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLN 213
            :...|.|:::|.:||.:.....:.|||:..|...:...:|.||:.:||.|:....:.........
Mouse   177 DKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNY 241

  Fly   214 STNVEVMTMTKE 225
            |..|..|...||
Mouse   242 SGGVVNMYHMKE 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 48/202 (24%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 45/192 (23%)

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