DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ITGB7 and Itgbn

DIOPT Version :9

Sequence 1:NP_000880.1 Gene:ITGB7 / 3695 HGNCID:6162 Length:798 Species:Homo sapiens
Sequence 2:NP_001303333.1 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster


Alignment Length:787 Identity:244/787 - (31%)
Similarity:370/787 - (47%) Gaps:89/787 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    45 CQPAPSCQKCILSHPSCAWCKQLNFTASGEAEARRCARREELLARGCPLEELEEPRGQQEVLQDQ 109
            |:.|.||::|:.:|..||||....:..     ..||..|.:||...|...::.|.:...:||||:
  Fly    33 CRHADSCERCLSAHLECAWCTDKEYQV-----GYRCLSRRQLLNYNCSETDIYENQPVLDVLQDK 92

Human   110 PLSQGARGEGATQLAPQRVRVTLRPGEPQQLQVRFLRAEGYPVDLYYLMDLSYSMKDDLERVRQL 174
            ||......:.|.|:.|||..:.|..|..|::::.:..|...|:|||.||||:::|:||.:.:.:|
  Fly    93 PLKDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEEL 157

Human   175 GHALLVRLQEVTHSVRIGFGSFVDKTVLPFVSTVPSKLRHPCPTRLERCQSPFSFHHVLSLTGDA 239
            |..|...|:.:|.:.|:|||||.||..||.:  :|....:||......|:..:.:.|.||||.|.
  Fly   158 GAQLSQTLKNLTGNYRLGFGSFADKPTLPMI--LPQHRENPCAAERATCEPTYGYRHQLSLTDDI 220

Human   240 QAFEREVGRQSVSGNLDSPEGGFDAILQAALCQEQIGWRNVSR-LLVFTSDDTFHTAGDGKLGGI 303
            .||...|....::||||:.|||.||::|..:|.::|||:..:| :::..:|...|.||||.|.||
  Fly   221 PAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVVILVTDGFMHLAGDGLLAGI 285

Human   304 FMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQPIFAVTSAALPVYQELSKLIPK-SA 367
            ...:|..|||:..|.|:.|..:||||:.::.:.|....|..|||||...:..|.|||.|:.: |.
  Fly   286 IQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFAVTEEVVSSYWELSALMKEISY 350

Human   368 VGELSEDSSNVVQLIMDAYNSLSSTVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVR 432
            |..||.||||:::||..:|.||........:| |..:.::|.:.|.|   :....:.|..||:|.
  Fly   351 VDILSADSSNILELIKKSYESLIKRTQFADNS-PDFIDMAYYTDCGG---QFPSLQKRNYCNNVT 411

Human   433 INQTVTFWVSLQATHCLPE----PHLLRLRALGFSE--ELIVELHTLCDCNCSDTQPQAPHCSDG 491
            :.:.:.|:|.:.... .|:    .|.:|:.....||  :|.|||...|.|.    :...|...:|
  Fly   412 LGKQIDFYVDVTLKK-YPDNQVYTHKIRVEETSLSEFMDLDVELQRPCPCQ----ETPDPENEEG 471

Human   492 ------QGHLQCGVCSCAPGRLGRLCEC---SVAELSSPDLESGCRAP---NGTGPL-CSGKGHC 543
                  :|:|.||:|.|..|..|..|.|   :....|:..|...||.|   ..|..| ||..|.|
  Fly   472 RFLCDYKGYLYCGMCECDEGWTGTYCNCPTDATNVTSNEALLQKCRQPFSDKSTSELVCSNHGDC 536

Human   544 QCGRCSCSGQSSGHLCECDDA-SCERHEGILCGGFGRCQCGVCHCHANRTGRACECSGDMDSCIS 607
            .||.|.|....:|..|||.:. .|:..       ...|.||.|.|....:|..|.|.||.|:|:.
  Fly   537 DCGTCLCDPGYTGPFCECRECLDCDEK-------LADCFCGQCVCKYGWSGSKCNCDGDTDACVG 594

Human   608 PEGGLCSGHGRCKCNRCQCLDGYYGALCDQCPGCKTP-CERHRDCAEC--------GAFRTGPLA 663
            |.|.:||..|.|:|..|||.:.|.|..|:..|..... |..:..|..|        |      :.
  Fly   595 PTGEICSERGTCQCEECQCEEPYLGKFCEIDPEKDNKLCLFYEPCVTCLIEQKQGMG------VC 653

Human   664 TNCSTACAHT--------NVTLALAPILDDGWCKERTLD------NQLFFFLVEDDARGTVVLRV 714
            .|.:..|:..        |....|.|..|.  |..|.::      :..|.:.|.|.:....:   
  Fly   654 ENLTEICSSLDRQETYPYNFVHELDPEQDQ--CLVRLVNKHGIQCDSFFVYQVIDHSNFLTI--- 713

Human   715 RPQEKGADHTQAIVLGCVGGIVA----VGLGLVLAYRLSVEIYDRREYSRFEKEQQQLNWKQDSN 775
                :..|......:..||.|.|    :||.::......:...|.|||::||::|:  |..:..|
  Fly   714 ----QAVDCEPPDYVALVGYISAFTLLIGLLIIFIILWYIRAKDAREYAKFEEDQK--NSVRQEN 772

Human   776 PLYKSAI 782
            |:|:..:
  Fly   773 PIYRDPV 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ITGB7NP_000880.1 INB 50..476 CDD:197563 150/433 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 98..124 9/25 (36%)
Cysteine-rich tandem repeats 478..640 57/175 (33%)
VESA1_N 537..>645 CDD:289551 39/109 (36%)
EGF_2 607..635 CDD:285248 12/27 (44%)
Integrin_B_tail 645..717 CDD:285239 15/93 (16%)
Integrin_b_cyt 750..791 CDD:285884 11/33 (33%)
ItgbnNP_001303333.1 INB 38..460 CDD:197563 150/433 (35%)
EGF_2 524..552 CDD:285248 11/27 (41%)
Integrin_b_cyt 748..785 CDD:285884 11/34 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1226
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223415at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100678
Panther 1 1.100 - - O PTHR10082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
65.780

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