DRSC/TRiP Functional Genomics Resources

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Protein Alignment mbl and Mbnl2

DIOPT Version :9

Sequence 1:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_038949574.1 Gene:Mbnl2 / 680445 RGDID:1591755 Length:385 Species:Rattus norvegicus


Alignment Length:445 Identity:165/445 - (37%)
Similarity:222/445 - (49%) Gaps:109/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRDKPPCKYFHP 78
            :|::||.|||||::||..|||.|.||||||||.:.:|:||:|.||:||:||||:|:.  |||.||
  Rat     9 RDTKWLTLEVCRQYQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSREN--CKYLHP 71

  Fly    79 PQHLKDQLLINGRNHLALKNA----LMQQMG-IAPGQPVISGQVPAVATNPYLTGIPANSYSPYY 138
            |.|||.||.|||||:|..:..    |.|||. :.||.|:  ..||.....|.:....|.|::|| 
  Rat    72 PTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPL--HPVPTFPVGPTIGTNAAISFAPY- 133

  Fly   139 TTGHLVPALLGPDPVTSQLGPVVPQTV----------QVAQQKIPRSDRLEVCREFLRGACKRAE 193
                |.|...|...|.:::.|..|..|          ..|.||:.|:|:|||||||.||.|.|.|
  Rat   134 ----LAPVTPGVGLVPTEVLPTTPVIVPGSPPVTVPGSTATQKLLRTDKLEVCREFQRGNCARGE 194

  Fly   194 SECRFAHPQES-VARHDDGSITVCMDAVKGRCARDPCRYFHPPLHLQAQLKAAQTRA--TAVAAA 255
            ::||||||.:| :...:|.::|||||.:||||.|:.|:|||||.||||::||||.:|  .||||.
  Rat   195 TDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCMREKCKYFHPPAHLQAKIKAAQHQANQAAVAAQ 259

  Fly   256 AAVWLYTIY---------------FSILFEPSLCMDVKTVGSFYYDNFQFSGMVPFKRPAAEKS- 304
            ||....|:.               ..:.|.|         |:.:        .:| ||.|.||| 
  Rat   260 AAAAAATVMTQSTAKALKRPLEATVDLAFPP---------GALH--------PLP-KRQALEKSN 306

  Fly   305 -GIPVYQPGATAYQQLMQPYVPVSCEYPQQQQQPPPQQQQQQQHQQQNVLLQQQLQLSSVITTTS 368
             ...|:.|....|||.:                   ...|.|||       ...:...||:..|.
  Rat   307 GASTVFNPSVLHYQQAL-------------------TSAQLQQH-------TAFIPTGSVLCMTP 345

  Fly   369 TTATASNNMINNNINNKGIINAVMASTNITSSATTTASSSLLSALGTPPTTTTTA 423
            .|:               |:..:.::|:.|.||.||.::|:      |...|.||
  Rat   346 ATS---------------IVPMMHSATSATVSAATTPATSV------PFAATATA 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 17/25 (68%)
Mbnl2XP_038949574.1 ZnF_C3H1 17..40 CDD:214632 16/22 (73%)
ZnF_C3H1 178..202 CDD:214632 16/23 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341327
Domainoid 1 1.000 136 1.000 Domainoid score I4806
eggNOG 1 0.900 - - E1_KOG2494
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I4325
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001679
OrthoInspector 1 1.000 - - otm45060
orthoMCL 1 0.900 - - OOG6_109473
Panther 1 1.100 - - LDO PTHR12675
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.790

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