DRSC/TRiP Functional Genomics Resources

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Protein Alignment mbl and mbnl2

DIOPT Version :10

Sequence 1:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster
Sequence 2:NP_001428758.1 Gene:mbnl2 / 560384 ZFINID:ZDB-GENE-030131-9582 Length:388 Species:Danio rerio


Alignment Length:358 Identity:159/358 - (44%)
Similarity:202/358 - (56%) Gaps:48/358 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VNMNSLLNGKDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRD 69
            :|:.|:   :|::||.|||||:|||..|||.|.||||||||.:.:|:||:|.||:||:||||.|:
Zfish     3 LNIASI---RDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCTRE 64

  Fly    70 KPPCKYFHPPQHLKDQLLINGRNHLALKNA----LMQQMG-IAPG---QPVISGQVPAVATNPYL 126
            .  |||.|||.|||.||.|||||:|..:..    |.|||. :.||   ||     ||....:..|
Zfish    65 N--CKYLHPPAHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMIPGTTMQP-----VPTFPVSQGL 122

  Fly   127 TGIPANSYSPYYT-TGH---LVPA-LLGPDPVTSQLGPVVPQTVQVAQQKIPRSDRLEVCREFLR 186
            ...|..||:||.| ..|   |||. :|...||.....|.|......:.||:.|:|:|||||||.|
Zfish   123 GSNPGLSYAPYLTPMSHGMGLVPTEMLPSTPVIVPGSPPVSVPSSSSTQKLLRTDKLEVCREFQR 187

  Fly   187 GACKRAESECRFAHPQES-VARHDDGSITVCMDAVKGRCARDPCRYFHPPLHLQAQLKAAQTRA- 249
            |.|.|.|::||||||.:| :....|.::|||||.:|.||:|:.|:|||||.||||::||||.:| 
Zfish   188 GNCARGETDCRFAHPSDSPMIDTSDNTVTVCMDYIKSRCSREKCKYFHPPAHLQAKIKAAQHQAN 252

  Fly   250 -TAVAAAAAVWLYTIYFSILFEPSLCMDVKTVGSFYYDNFQFSGMVPF-KRPAAEKS--GIPVYQ 310
             |||||.||....|...:...:..|...|...       |....:.|. ||||.|||  ...::.
Zfish   253 QTAVAAQAAAAAMTQSTAKAMKRPLEASVDLA-------FPHGVLQPLPKRPALEKSNGASTLFN 310

  Fly   311 PGATAYQ------QLMQP---YVP---VSCEYP 331
            |....||      ||.||   :.|   |.|..|
Zfish   311 PSVLHYQQALASAQLQQPTAAFFPTGSVLCMAP 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 17/25 (68%)
MSCRAMM_ClfA <428..553 CDD:468110
mbnl2NP_001428758.1 None
Blue background indicates that the domain is not in the aligned region.

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