DRSC/TRiP Functional Genomics Resources

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Protein Alignment mbl and Mbnl3

DIOPT Version :10

Sequence 1:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_006541498.1 Gene:Mbnl3 / 171170 MGIID:2444912 Length:354 Species:Mus musculus


Alignment Length:438 Identity:155/438 - (35%)
Similarity:208/438 - (47%) Gaps:130/438 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRDKPPCKYFHP 78
            :|::||.|||||||||..|||.|.||:|||||....|:||:|.||:||:||||.|:.  |||.||
Mouse    10 RDTKWLTLEVCREFQRGTCSRADAECRFAHPPRVCHVENGRVVACFDSLKGRCTREN--CKYLHP 72

  Fly    79 PQHLKDQLLINGRNH----------------LALKNALMQQMGIAPGQPVISGQVPAVATNPYLT 127
            |.|||.||.:||||:                |.|:||.|..:...|..|.::.. ||:|.|||:|
Mouse    73 PPHLKSQLEVNGRNNLIQQKTAAAMFAQHMQLMLQNAQMSSLASFPMNPSLAAN-PAMAFNPYMT 136

  Fly   128 G-----IPAN--SYSPYYTTGH---LVPALLGPDPVTSQLGPVVPQTVQVAQQKIPRSDRLEVCR 182
            .     :||.  ...|...:|:   .:|.:.||.|:                    |:|||||||
Mouse   137 HPGMGLVPAELLPNGPVLISGNPPLALPGVPGPKPI--------------------RTDRLEVCR 181

  Fly   183 EFLRGACKRAESECRFAHPQE-SVARHDDGSITVCMDAVKGRCARDPCRYFHPPLHLQAQLKAAQ 246
            ||.||.|.|.|||||:|||.: |:....|.|:|:|||.:||||:|:.|:|||||.||||:|:||.
Mouse   182 EFQRGNCTRGESECRYAHPTDVSMIEVTDNSVTICMDYIKGRCSREKCKYFHPPPHLQAKLRAAH 246

  Fly   247 TRATAVAAAAAVWLYTIYFSILFEPSLCMDVKTVGSFYYDNFQFSGMVPFKRPAAEKS--GIPVY 309
            .:....||.|....:                   |:..        ::| ||.|.:|:  ..||:
Mouse   247 HQMNHSAANAMALPH-------------------GALQ--------LIP-KRSALDKANGATPVF 283

  Fly   310 QPGATAYQQLMQPYVPVSCEYPQQQQQPPPQQQQQQQHQQQNVLLQQQLQLSSVITTTSTTATAS 374
            .|.....||.:     .:.:.|||...|..|           :|         .:|.|||.....
Mouse   284 NPSVFHCQQAL-----ANMQIPQQAFIPTGQ-----------IL---------CMTPTSTFVPMM 323

  Fly   375 NNMINNNINNKGIINAVMASTNITSSATTTASSSLLSALGTP--PTTT 420
            :.                |:.:..|:||..||:       .|  ||||
Mouse   324 HG----------------ATPSTVSTATPPASN-------VPYVPTTT 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 19/25 (76%)
MSCRAMM_ClfA <428..553 CDD:468110
Mbnl3XP_006541498.1 ZnF_C3H1 18..41 CDD:214632 17/22 (77%)
ZnF_C3H1 176..200 CDD:214632 18/23 (78%)
Blue background indicates that the domain is not in the aligned region.

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