DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mbl and mbnl1

DIOPT Version :9

Sequence 1:NP_001261046.1 Gene:mbl / 36945 FlyBaseID:FBgn0265487 Length:956 Species:Drosophila melanogaster
Sequence 2:XP_004914502.1 Gene:mbnl1 / 100498648 XenbaseID:XB-GENE-6035557 Length:494 Species:Xenopus tropicalis


Alignment Length:558 Identity:181/558 - (32%)
Similarity:233/558 - (41%) Gaps:205/558 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 KDSRWLQLEVCREFQRNKCSRQDTECKFAHPPANVEVQNGKVTACYDSIKGRCNRDKPPCKYFHP 78
            :|::||.|||||||||..|||.|||||||||..:.:|:||:|.||:||:||||:|:.  |||.||
 Frog     9 RDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSREN--CKYLHP 71

  Fly    79 PQHLKDQLLINGRNHL-ALKNALM--QQMGIA----PG---QPV-ISGQVPAVAT------NPYL 126
            |.|||.||.|||||:| ..||..|  |||.:|    ||   ||| :....|::||      ||||
 Frog    72 PPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMIPGTQIQPVPMFSVAPSLATSATAAFNPYL 136

  Fly   127 TGIPANSYSPYYTTGHLVPALLGPDPVTSQLGPVVPQTVQVAQQKIPRSDRLE------------ 179
            ..:     ||......::|..  |..||...|..||.....|.||:.|:||||            
 Frog   137 GPV-----SPGLMPAEILPTT--PMLVTGNPGVAVPSAAAAAAQKLMRTDRLEASYNQAAAVRAS 194

  Fly   180 ----------------------------------------------------------------- 179
                                                                             
 Frog   195 PRCPTNDLSPDVEGAPSLWVRGSSVSMPAQSWASPEQRLPIVPNYVWWFCDVDSCPLGTELRPAN 259

  Fly   180 ------------------VCREFLRGACKRAESECRFAHPQES-VARHDDGSITVCMDAVKGRCA 225
                              ||||:.||.|.|.|:|||||||.|| :...:|.::|||||.:||||:
 Frog   260 SFHLGHQAGLDPRSQKRKVCREYQRGNCNRGENECRFAHPAESAMIDTNDNTVTVCMDYIKGRCS 324

  Fly   226 RDPCRYFHPPLHLQAQLKAAQTR----ATAVAAAAAVWLYTIYFSILFEP-SLCMDV---KTVGS 282
            |:.|:|||||.||||::||||.:    |.|.|||.|..:.......|..| ....|:   :||  
 Frog   325 REKCKYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQTV-- 387

  Fly   283 FYYDNFQFSGMVPF-KRPAAEKS--GIPVYQPGATAYQQLMQPYVPVSCEYPQQQQQPPPQQQQQ 344
                      :.|. ||||.||:  ...|:..|...|||.:                        
 Frog   388 ----------LPPLPKRPALEKTNGATGVFNTGFFQYQQAL------------------------ 418

  Fly   345 QQHQQQNVLLQQQLQL---SSVITTTSTTATASNNMINNNINNKGIINAVMASTNITSSATTTAS 406
                 .|:.||||...   .|::..|    .|:|           ::..|..:...|.||..|::
 Frog   419 -----ANMQLQQQAAFFPPGSILCMT----PAAN-----------VVPMVHGAAPATVSAAATSA 463

  Fly   407 SSLLSALGTPPTTTTTAITNPNDSDNDSDRNQDHDKNH 444
            :|:      |...|.||...|..|       .||..||
 Frog   464 TSV------PFAATATANQIPIIS-------ADHLSNH 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mblNP_001261046.1 ZnF_C3H1 175..201 CDD:214632 18/120 (15%)
mbnl1XP_004914502.1 ZnF_C3H1 273..299 CDD:214632 14/25 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 149 1.000 Domainoid score I4389
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 146 1.000 Inparanoid score I4320
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001679
OrthoInspector 1 1.000 - - otm48120
Panther 1 1.100 - - O PTHR12675
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11109
SonicParanoid 1 1.000 - - X1238
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.