DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and cdm

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001262696.1 Gene:cdm / 42171 FlyBaseID:FBgn0261532 Length:971 Species:Drosophila melanogaster


Alignment Length:686 Identity:122/686 - (17%)
Similarity:257/686 - (37%) Gaps:185/686 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SSGNISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLAKKIKTSFYSLQKFQLMS 82
            :|.|.::.:|:|...:.|...|..:.:::......::..  |.|::|..|:...::.:.......
  Fly    20 NSQNQAITHEWLTDAEASPQAWQFSWQLMQLGKSQEVQF--FGAITLHSKLMKHWHEVPPENREE 82

  Fly    83 LKNSLIDHL-KYAAMMRDSNSLIVQLAVGISA-LGLMFSQWDYELQDFVR--------KLSENPQ 137
            ||..:::.: ::|.   ....::.:|.:.:.| :..|..:|...:::.:.        .:|.:.|
  Fly    83 LKQKILESIVRFAG---GPKIVLNRLCISLGAYIVHMLGEWPGAIEEVINTFQNQRMPNVSADVQ 144

  Fly   138 YVMALLEVLKVIPEETRPSNLPVE--------AKKLNSVIDTLEQ----QSPYILD--------- 181
             :..:||||..||||.:..:..|:        ||::..||.|:|:    |...:.|         
  Fly   145 -LWIMLEVLTAIPEEAQVIHTSVKRVVLRAEIAKRVQLVIHTVERYLKLQMNRVWDAEAYSNMNR 208

  Fly   182 --------------VLEGLLQRPDLPDDALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILA 232
                          .:||.:....:..:.:.||...|.......|.:.:..|..........|:.
  Fly   209 AVKCVGTWIKNIGYTIEGCVTITAVLLEVVHKCYWPCIHAGDGCMTADENELAESCLKTMVNIII 273

  Fly   233 TPLVNGHLEAAELFVALLEQSLIRKELNSCLANSVICLKPAFKRSMGERSLLQNYCNIFVNLFQT 297
            .|..:.:.:.|.:.:.:...||  .|:.          |..:||......::.:...:||:..:.
  Fly   274 QPDCHNYPKTAFVLIKMFLDSL--SEIT----------KTEWKRENDNEDIIVHIYMLFVSSVER 326

  Fly   298 HFRL-----TQTNPER--LNERLVTIELLLLVAEESPLEVIEAS-----LGMWSSISEEVY-LHD 349
            |..|     |..:||.  |..|:|  :.:|...::..:..:|.|     |..|..:.:||: :.:
  Fly   327 HSTLLLSGITSADPELSILVHRIV--QEILHCTDKPGIYPVEESCSTMALAFWYMLQDEVFAMSN 389

  Fly   350 DPEMYSVYQ---PYFVRLLDLLLPRAALPANYEFMMPPGSADMQRFR--------------ELIG 397
            |.:.:..::   |.:..|..:|:.::..| :.:.:....|.|::.||              :::.
  Fly   390 DEQKHKCWEYIKPLYAHLTRILVRKSEQP-DEKSLAKWSSDDLECFRCYRQDISDTFMYCYDVLN 453

  Fly   398 EVLLD-MAHMIDDDTVEKLCSIVVDEQ---SPWMEVEASVFFLRHLIGNFKEHQTDIISCILKTF 458
            :.:|: :|.|:|:        .:.|.|   :.|.::||.::..:.:..:|...:...|..:::..
  Fly   454 DYILEILAAMLDE--------AIADLQRHPTHWTKLEACIYSFQSVAEHFGGEEKRQIPRLMRVL 510

  Fly   459 FQKDCQQPFIRLQV------LELIS------------IPEIVSV------------------ETI 487
                .:.|:.:|.|      ||.:.            ||..:::                  |..
  Fly   511 ----AEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGLNSSMSAQATLGLKELC 571

  Fly   488 WDCLVNELRRADPMLSAIDCRLNLLMPHWNYLVTLAIMVDEFCLKESERCELLCSI---CTLIR- 548
            .||.:.....|||:|:|....||...                 :|.|:...|:.||   .:|:| 
  Fly   572 RDCQLQLKPYADPLLNACHASLNTGR-----------------MKNSDSVRLMFSIGKLMSLLRP 619

  Fly   549 ----------------ELPAACVQEAKTSILNIRWI 568
                            ||.|.|..::||....||.|
  Fly   620 EEIPKYLDIIVSPCFEELQAICQADSKTPAARIRTI 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 10/65 (15%)
Xpo1 103..>207 CDD:285575 28/147 (19%)
cdmNP_001262696.1 IBN_N 28..92 CDD:281761 10/65 (15%)
Xpo1 98..>217 CDD:285575 23/119 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441202
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004114
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12363
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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