DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10950 and tnpo3

DIOPT Version :10

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_957381.1 Gene:tnpo3 / 394062 ZFINID:ZDB-GENE-040426-708 Length:923 Species:Danio rerio


Alignment Length:585 Identity:146/585 - (24%)
Similarity:265/585 - (45%) Gaps:41/585 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TKELVIDAVNML----SSGNISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLAK 66
            |..||..||..|    .......|:.:|...|:|...|.|::::|..:  .|:....|||.::..
Zfish     7 TLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLK--QDIESCYFAAQTMKM 69

  Fly    67 KIKTSFYSLQKFQLMSLKNSLIDHLKYAAMMRDSNSLIV-QLAVGISALGLMFSQWDYELQDFVR 130
            ||:||||.|......:|::||:.|::   .::|.:.:|| |||:.|:.|.|..:.|...:...:.
Zfish    70 KIQTSFYELPPDSHTALRDSLLSHIQ---NLKDLSPIIVTQLALAIADLALQMASWKGCVHTLIE 131

  Fly   131 KLSENPQYVMALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEGLLQRPDLPDD 195
            |.|.:...:..|:|:|.|:|||....:|.:.|.:...:|:.|...|..::.:|....::....:.
Zfish   132 KYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTVVTLLVTCAEKSGHDEK 196

  Fly   196 ALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILATPLVNGHL-EAAELFVA----LLEQSLI 255
            .|.|......||....:|..:.:...:|.::...:|.....:.:| |||...|.    .:|...|
Zfish   197 MLIKVFRCLGSWFNLGVLDNNFMANNQLLMILFQVLQRDETSTNLHEAASDCVCSALYAIENVAI 261

  Fly   256 RKELNSCLANSVICLKPAFKRSMGERSL--LQNYCNIFVNLFQTHFRLTQTNPERLNERLVTIEL 318
            ...|...|...|:.|:.|:..::....|  :.|||.||..|.:|...:|...|.:....|.|:||
Zfish   262 HLPLAMQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTELCETFLEMTVRTPGQGMGDLRTLEL 326

  Fly   319 LLLVAEESPLEVIEASLGMWSSISEEVYLHDDPEMYSVYQPYFVRLLDLLLPRAALPANYEFMMP 383
            ||:.|.....||:|.|...|..:.|.:|..:||.:::|::||..|||..|.....|..::| .:|
Zfish   327 LLICAGHPQYEVVEISFNFWYRLGEHLYKINDPALHNVFRPYIQRLLHSLARHCQLDPDHE-GVP 390

  Fly   384 PGSADMQRFRELIGEVLLDMAHMIDD-DTVEKLCSIVVDEQSPWMEVEASVFFLRHLIGNF-KEH 446
            ..:.|...||..:.:::.|:..::.. :...:|.|.:.:...||...||.:|.:..:..|. .|:
Zfish   391 EDTDDFGEFRMRVSDLVKDVIFLVGSMECFAQLYSTLREGNPPWEVTEAVLFIMASIAKNVDPEN 455

  Fly   447 QTDIISCILKTFFQKDCQQPFIRLQVLELI-SIPEIVS-----VETIWDCLVNELRRADPMLSAI 505
            ...::..:.:.....:.....:|...:||: .:.|::.     ::|:.:.|:..||. .|:.||.
Zfish   456 NPTLMEVLEQIVLLPETVHLAVRYTSIELVGEMSEVIDRNPSMLDTVLNFLMKGLRE-KPLASAA 519

  Fly   506 D---------CRLNLLMPHWNYLVTLAIMVDEFCLKESERCELLCSICTLIRELP----AACVQE 557
            .         || :.:..|:..|:.:|..:|.|.|.......||.....::..||    |.|:.:
Zfish   520 AKAIHNICSVCR-DHMAQHFQGLLDIARSLDSFALSTDAAVGLLKGTALVLARLPLEKIAECLND 583

  Fly   558  557
            Zfish   584  583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 21/65 (32%)
Xpo1 103..>207 CDD:462459 26/104 (25%)
tnpo3NP_957381.1 IBN_N 30..96 CDD:197981 22/70 (31%)
Xpo1 120..249 CDD:462459 27/128 (21%)

Return to query results.
Submit another query.