DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and Tnpo-SR

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001259961.1 Gene:Tnpo-SR / 33465 FlyBaseID:FBgn0031456 Length:932 Species:Drosophila melanogaster


Alignment Length:597 Identity:139/597 - (23%)
Similarity:275/597 - (46%) Gaps:41/597 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FTKELVIDAVNMLSSGN----ISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSLA 65
            ::.::|..|::.|..||    ...||::|..||||..:|.||:|:|..:  .|:|...|||.::.
  Fly     4 YSVDVVYQAISALFQGNNPKEQEKANKWLQDFQKSIYSWTIADELLHQK--RDLHANYFAAQTMR 66

  Fly    66 KKIKTSFYSLQKFQLMSLKNSLIDHLKYAAMMRDSNSLIVQLAVGISALGLMFSQWDYELQDFVR 130
            .||:.||..|......||::|||.|:.......| |.::.||::.::.|.|:.:.|...:.|.:.
  Fly    67 NKIQNSFSELPPHTHESLRDSLITHIGQIDEQTD-NVIVTQLSLAVADLALLMASWREPINDLLV 130

  Fly   131 KLSENPQYVMALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEGLLQRPDLPDD 195
            .|:.:...:..|||||||:|||.....|.:.|.:...|...|:..:..:|..|...|||.||...
  Fly   131 TLAPHQCAIWPLLEVLKVLPEEIDSRYLRLGANRREEVHKQLDASAECVLKFLCMCLQREDLDQQ 195

  Fly   196 AL-PKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILATPLVNG--HLEAAELFVALLEQSLIRK 257
            .: ...|...::|..........|....|..:|..:|:.|..:|  |..|.|...|||.....|:
  Fly   196 RVWNAALRTYSAWLVIHAFPVSHVYNNALTQLAFRLLSLPETSGKLHDNATECVCALLSCINTRQ 260

  Fly   258 E--------LNSCLANSVICLKPAFKRSMGERSLLQ--NYCNIFVNLFQTHFRLTQTNPERLNER 312
            :        ..:.|..:|..|:..:..|:......:  |||.||.:|....|.....:.::.:..
  Fly   261 DGASDPESSFEAQLFGAVCMLETPYHLSVAHEDTDKTINYCRIFTSLCDAFFYDLLADAQKPHYS 325

  Fly   313 LVTIELLLLVAEESPLEVIEASLGMWSSISEEVYLHDDPEMYSVYQPYFVRLLDLLLPRAALPAN 377
            |..::|:||.......||.|.:..:|..:||:::..::.::..:::|:..||:..|...:.:.::
  Fly   326 LKGLDLVLLCVGHFDYEVAEITFHLWYKLSEDLFQRNEDKLTVLFRPHIERLISALFRHSQMESD 390

  Fly   378 YEFMMPPGSADMQRFRELIGEVLLDMAHMIDDDT-VEKLCSIVVDEQSPWMEVEASVFFLRHLIG 441
            ::.::...: :...||..:.:::.|:|.::.... .:::..|:...::.|...||::|.::::..
  Fly   391 HDGLIEENN-NFFDFRRKVSDLIKDVAFIVGSGACFKQMFHILQAPETTWESTEAALFIMQNVAK 454

  Fly   442 NFKEHQTDIISCILKTFFQKDCQQPFIRLQVLELISIPEIV--------SVETIWDCLVNELRRA 498
            |....:.::|..:::...... :|..|.::...::.|.|:.        |:|.:.:.|:..|::.
  Fly   455 NILPDENEVIPKVVEAILNMS-EQTHIAVRYTAILLIGELCDWIENHPESLEAVLNFLLYALQQK 518

  Fly   499 DPMLSAI---------DCRLNLLMPHWNYLVTLAIMVDEFCLKESERCELLCSICTLIRELPAAC 554
            :.:..|.         .||..::. |.:.||.:|..:|.|.:.......||..|..::..||...
  Fly   519 NGLAPAAAIALTSICSACRQKMVC-HISGLVEIARSLDSFQINNDVAIGLLKGISLILTRLPREQ 582

  Fly   555 VQEAKTSILNIR 566
            :|.|...|:..:
  Fly   583 LQPALREIVGFQ 594

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 27/65 (42%)
Xpo1 103..>207 CDD:285575 29/104 (28%)
Tnpo-SRNP_001259961.1 IBN_N 28..94 CDD:281761 28/67 (42%)
Xpo1 100..248 CDD:285575 40/148 (27%)
HEAT repeat 427..454 CDD:293787 5/26 (19%)
HEAT repeat 462..496 CDD:293787 5/34 (15%)
HEAT repeat 506..531 CDD:293787 3/24 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441201
Domainoid 1 1.000 45 1.000 Domainoid score I3093
eggNOG 1 0.900 - - E1_KOG2081
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12363
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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