DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and Ipo13

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_666264.1 Gene:Ipo13 / 230673 MGIID:2385205 Length:963 Species:Mus musculus


Alignment Length:616 Identity:139/616 - (22%)
Similarity:255/616 - (41%) Gaps:114/616 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EFTKELVIDAVNML----SSGNISLANEYLAAFQKSNDTWIIAEEILSYRPPHDMHILTFAAMSL 64
            :||.|.|..|::.|    :..|.:||.::|...|.|...|..:.::|  :|.....|..|.|.:|
Mouse    20 DFTVENVEKALHQLYYDPNIDNKNLAQKWLMQAQVSPQAWHFSWQLL--QPDKVPEIQYFGASAL 82

  Fly    65 AKKIKTSFYSLQKFQLMSLKNSLIDHL-KYAAMMRDSNSLIVQLAVGIS--ALGLMFSQWDYELQ 126
            ..||...:..:...|..|||..|...: ::|:   .|..::.:|.|.::  ||.:|...|...:.
Mouse    83 HIKISRYWSDIPTDQYESLKAQLFTQITRFAS---GSKIVLTRLCVALASLALSMMPDAWPCAVA 144

  Fly   127 DFVRKLSENPQYV------MALLEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEG 185
            |.||........|      :||||:|.|:|||.:.|.||...|.|  |..:|..:...:..:||.
Mouse   145 DMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYRKGL--VRTSLAVECGTVFPLLEQ 207

  Fly   186 LLQRPDLPDDALPKCLAVCASWTKFSMLSPDQVLQRKLFIMAEFILATPLVNGHLEAAELF---- 246
            |||:|..|.....|.|...:||.:..:...|    .:..|.|.|        ..|:.:|||    
Mouse   208 LLQQPSSPSCVRQKVLKCFSSWVQLEVPLQD----CEALIQAAF--------AALQDSELFDSSV 260

  Fly   247 ---VALLEQSLIRKELNSC--LANSVICLKPAFKRSM--GERSLLQNYCNIFVNLFQTHFRLTQT 304
               |..:.|...::.:|:.  |...|:.|:...::::  |:.......|.|.|.|.:.|.|....
Mouse   261 EAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLD 325

  Fly   305 NPERLNERLVTIELLLL---VAEESPLEVIEASLGM--WSSISEEVYLHDDPEMYSVYQ----PY 360
            ..|.....|..:.:::.   :....|:....:||.:  |.::.::: |..:.|..:|||    |.
Mouse   326 QVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFWYTLQDDI-LSFEAEKQAVYQQVYRPV 389

  Fly   361 FVRLLDLLLPRAALPANYEFMMPPG---SADMQRFR--------------ELIGEVLLDMAHMID 408
            :.:|:|:||.:|..|::.|:    |   |.:.::||              |::|..||       
Mouse   390 YFQLVDVLLHKAQFPSDEEY----GFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELL------- 443

  Fly   409 DDTVEKLCSIVVDEQSP--WMEVEASVFFLRHLIGNFKEHQTDIISCILKTFFQKDCQQPFIRLQ 471
            .:..:||..::...:.|  |...||.::..:.:......:.:|::..:               :.
Mouse   444 SNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGL---------------IG 493

  Fly   472 VLELISIPEIVSVETIWDCL--VNELRRADPMLSAIDCRLNLLMPHWNYLVTLAIMVDEFCLKES 534
            ::..|||..:...:|:...:  ::|.....|::      :|.::|    ||..|:...|..:...
Mouse   494 LIPRISISNVQLADTVMFTIGALSEWLADHPVM------INSVLP----LVLHALGNPELSVSSV 548

  Fly   535 ERCELLCSICTLIRELP--AACVQEAKTSIL 563
            ...:.:|..|..  :||  ||.:......:|
Mouse   549 STLKKICRECKY--DLPPYAANIVAVSQDVL 577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981 18/65 (28%)
Xpo1 103..>207 CDD:285575 35/111 (32%)
Ipo13NP_666264.1 CRM1 20..>650 CDD:227432 139/616 (23%)
HEAT 1 24..54 8/29 (28%)
IBN_N 45..109 CDD:197981 18/65 (28%)
HEAT 2 56..88 9/33 (27%)
HEAT 3 95..135 11/42 (26%)
Xpo1 116..263 CDD:285575 46/160 (29%)
HEAT 4 142..179 13/36 (36%)
HEAT 5 194..231 12/36 (33%)
HEAT 6 236..268 9/43 (21%)
HEAT 7 276..325 11/48 (23%)
HEAT 8 330..372 5/42 (12%)
HEAT 9 375..438 17/66 (26%)
HEAT 10 440..476 8/42 (19%)
HEAT 11 487..522 5/49 (10%)
HEAT 12 524..558 8/43 (19%)
HEAT 13 562..600 5/16 (31%)
HEAT 14 603..648
HEAT 15 676..716
HEAT 16 720..754
HEAT 17 761..803
HEAT 18 815..845
HEAT 19 860..893
HEAT 20 897..931
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004114
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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