DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10950 and tsr-1

DIOPT Version :9

Sequence 1:NP_611200.2 Gene:CG10950 / 36942 FlyBaseID:FBgn0034205 Length:586 Species:Drosophila melanogaster
Sequence 2:NP_001370995.1 Gene:tsr-1 / 173601 WormBaseID:WBGene00006647 Length:829 Species:Caenorhabditis elegans


Alignment Length:473 Identity:106/473 - (22%)
Similarity:190/473 - (40%) Gaps:70/473 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 LEVLKVIPEETRPSNLPVEAKKLNSVIDTLEQQSPYILDVLEGLLQRPDLPDDALPKCLAVCASW 207
            |.:|:|.|||..... .|...:.:::.:.|......::..|..:|::.....|.|.:......|.
 Worm     3 LTLLQVFPEEVEQIR-GVGENRRHAIRNELAACEQPMITFLSHVLEKFHSNADVLKRVFKCLESN 66

  Fly   208 TKFSMLSPDQVLQRKLFIMAEFILAT--PLVNG--HLEAAELFVALL---EQSLIRKELNSCLAN 265
            .:...:..|......|..|...::|:  |::..  |..|....|..|   |...:.::|...:..
 Worm    67 LQNHQMRTDHFAASPLISMIFHVIASIDPIIPSCLHETATNCIVQALYRVEDLEMHRKLAEVVHR 131

  Fly   266 SVICLKPAFKRS--MGERSLLQNYCNIFVNLFQTHF--RLTQTNPE-RLNERLVTIELLLLVAEE 325
            .||.|..||:::  :.:...|||...|||.:.::.:  .:.:.||: .....|...|||||||:.
 Worm   132 GVISLVSAFEKAQQVEDFDRLQNIARIFVEMVESFYVQIVNEANPDPAAIGSLACFELLLLVAKH 196

  Fly   326 SPLEVIEASLGMWSSISEEVYLHDDPEMYSVYQPYFVRLLDLLLPRAALPANYEFMMPPGSADMQ 390
            ....:||.|..:|..|:||::.:||.:....::||..:.:..|.....|.|:....:...:::..
 Worm   197 HDWALIEMSFNVWYRITEELFKYDDDQYIGRFRPYAEKFIQCLYEHCKLDADDVDDLLDETSEFG 261

  Fly   391 RFRELIGEVLLDMAHMIDDDTV-----EKLCSIVVDEQSPWMEVEASVFFLRHLIGNFKEHQTDI 450
            .||....|.|.|:..:::.|..     :||........:.|.|.|:::|.:..::.|...     
 Worm   262 EFRLKAVEALRDVVFIVNSDKCIQMMHQKLIECCHKPNASWEESESALFVMSAVVQNLLP----- 321

  Fly   451 ISCILKTFFQKDCQQPFIRLQVLELI------SIPEIVSVETIWDCLVNELRRADPMLSAIDCRL 509
                     :.|...|    :||:||      |.|.:::...   .|:::|.      ...:...
 Worm   322 ---------ESDTNMP----EVLQLICSLPVQSPPALIATSL---SLISDLN------DWFEQHS 364

  Fly   510 NLLMP--HW--------NYLVTLAIMVDEFCLK-ESERCELLCSICTLIRELP-----AACVQEA 558
            |||.|  .|        .|...:|:..|....| ..:...||..:.|||..|.     .|.|:||
 Worm   365 NLLEPVVRWTLQFATDTRYASHVALCFDRITSKCAVQMTPLLPQLLTLIGVLEQTTTNGAKVEEA 429

  Fly   559 KTSI---LNIRWIKCPAH 573
            ..|:   :::...|.|||
 Worm   430 ICSLTRAISMIASKLPAH 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10950NP_611200.2 IBN_N 25..91 CDD:197981
Xpo1 103..>207 CDD:285575 12/63 (19%)
tsr-1NP_001370995.1 Xpo1 <1..109 CDD:400614 20/106 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2081
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12363
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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